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Simple sequence repeat (SSR)
>UN13580
CAAGCAGAAAGCACACTCCCACTAATAACACTGTTTAAGACGTTCGTTCGATTGTTTTAATACAAGTTGGTATCATACATATACAGAGTAAAAC
GTAGATATATGTCATATCTCACAAGAACAAAAGCGCAATACAAAAAGAAAAACTCTTGGTAAGCTAACCACAGACAGACGGTTTATATCCAGCA
AAAGGCAAATGAAATCCTTAGTAGTTGATTATGGTTGACTTGTGTGTGTGTGTTAGCGGGCACCACCTTGATTCTTCAGCTCTAATAACCAAAT
CCTTACCTCATTTATTTTCTGGTAACAGGCATAATCACACAGGTTTTAGGTTTCTCAGGGTTTCCATGGTGCTGGTGGCGGCGGGGGAGTAGGG
AACAATGGAGGAACCGCTGAGAATATAGTGTTTTTGTCTATAGTACCAGATGCCTCCTCTTCACCCGACAATGCCACGAGAGCTGCGACCAGAC
CAGCATTTCCTGCAAGAGTCGGTTCGGTGTAGTTGTAGTTGGTCCGTACATCGCGGAACCCATCGCGCTTGTCAGGACCAGCAACCATGGCTCC
TTCAATCGTGTTCGGATTCGGTTTCTTGCTGTCTCTCCATTTCCATCCTCCTTTGCAGTTGTATTTGACTTTGTTCTTGGGAATCGAAGCTCCT
CTGTGATGCACGTGTTTCGGGTATTTTGGGCCAAACCCTACGAGATAACTCATTTTCCTAGGGTTTTTACCGAGTATGTAATCAATCTGAGTTC
TGGCAAACTCTCGTAGGACATTGGTTGAATAGAAATTAGGTCCACAGTACCATCCAGGAGTATCAGCAGCATCCAGATAATCACTGTACAACGT
AGCTAAGAAAGCTGCATTTGCAGCATACTGGAGGGGCTGTGGATCTCCATGATTTAACTCTATCAAACCTCCCCTGGTTCTGTTAAATTTGTTG
AAATAGGGCAAGTAGGAGCACATGACTATGCTGGTCTGATTATGAAATGTCCTTAGAATTTCTTCATAAGGATATCCAGGACTCAAAAACAACC
TCAACCGGCTCAGCAGCAACTGAGCACCAGCAAGCTTGTTGTCCCAGCTAAATACACCATAGTAAGGCCCACCCCAGAAGGCACCAGCATGCTT
AGCCATAGTTGGCTTTGTGATGAGATCGAGATAAGTTACGTTCCCCGTGGCATAGTATAACCAAGCACCACCCCAAATAAACTCATCCCAATAC
ATGCTTGAATTGTAAAACTTGGCTGATTCCGCAGTGCCTGCGCTGTATCTCCCTCTCCGAGTCCTTCCGAACTGATACACTGTCTTAGCACCAT
GCACAAGCTTCTTAGAATAGTCTCTGTTGTCTTTGAACACAATGGATGCTGAAGCCAGAGCAGCCGCCATCTCTGCGGCGAGATCCGAACATCC
GCCGTTACAAGTAGTCACAGGCCTTTTGTAGTCCATGTCTTCAGGTAGCATCCAGCAGTAATGGTCATTAC |
Primers for UN13580 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTCACAAGAACAAAAGCGCA |
60.172 |
20 |
CATGGAAACCCTGAGAAACC |
59.381 |
20 |
239 |
112 |
350 |
2 |
CTCACAAGAACAAAAGCGCA |
60.172 |
20 |
CCATGGAAACCCTGAGAAAC |
59.381 |
20 |
240 |
112 |
351 |
3 |
CTCACAAGAACAAAAGCGCA |
60.172 |
20 |
ACCATGGAAACCCTGAGAAA |
59.381 |
20 |
241 |
112 |
352 |
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