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Simple sequence repeat (SSR)
>UN13646
ATCCTCAACTTCTTAAACTTTTATATCTCAAAATACAAATGGACAATAGTACAAACCAAATAAGAAAAAAAAATCTAACCAACTCGGCATATAT
ATATTACATTTACGGAGACCATTATATATATTATTTATATATGAGATGCCGCAAAATATTTCTTAAAACTTAAATTAATACTTCTTAGCAAATG
CATTAATCAAGGACAGGGCGTTGCTAGTTTCGTGACCCACGTTAACAATTCTAGCTCGAACCGAGTTCTTGATCCTTCCATCCATGACCCGACC
CGAGAAACCATCGGAGCAAGTGTTCTCATCTGTCAAAGCCGCACTAGTCCAAGTCTGAGCATTACTCATGTGGAACGCAAACTGATCTTGATTT
TTGGCACTCCCACATAGCTTCATCTCTTGGACCGACTTGGTCAAACGGTCAATGGTATCGTTGATCTCCTCAACGCAGTCCTTGATGGCTTCGA
CCTCGCGCTTCTTAAGGCCCTTGAAACGCGTCAGACGCGAGACGAAGAGTTTGGTGGATTGGGCTCGGCTCAGGGTAACGGCTAGAGCGGTCTC
GGCTAAGCGTTTAGGGCTTGTTTGTATGGCGTTTGCGTAGGCTGAGAGGGAGTGGAAGCACACGGCTGGGTATGTGGTGGTTTTGCAAGAGGAT
TGGATGAAGTTCACGGCTTTGTTGGAGGCTCCAGCCCGTGAGGCTGCGGTGGCGGCAGTGAGCGCCGGCGAGAAGAAGAAGAAGATTGAGAGGA
TTAGAAAGAGAGTTTGGTTTAGTTTTGCCATTGGTGTTTCTTGTAAGAAAGCTAGATAGAAAGTGAAAGAATTGAGTGTCCC |
Primers for UN13646 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTGAGAGGGAGTGGAAGCAC |
59.986 |
20 |
CAAGAAACACCAATGGCAAA |
59.561 |
20 |
190 |
606 |
795 |
2 |
GGTTTTGCAAGAGGATTGGA |
60.051 |
20 |
CAAGAAACACCAATGGCAAA |
59.561 |
20 |
153 |
643 |
795 |
3 |
TAGGCTGAGAGGGAGTGGAA |
59.943 |
20 |
CAAGAAACACCAATGGCAAA |
59.561 |
20 |
194 |
602 |
795 |
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