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Simple sequence repeat (SSR)
>UN13649
GGACAAAAGAGGCTTATCTAGAATTACGAAATTACCAAAAGACCCCATCATCCTTCTCTCATCTCTGAAAGTATCGATCATCGAATTTGGGTGT
GTGTGTGGAAATATCTTCTCTTCTAAAAAGCATCAAACTTTTCTTTGCTTCTGATCTTCGCCTTCTTCTTCTTCTTCTTCTTCATCGCTGGAAA
TTGACGTTCCATGGCAAGAGTTTCGTTCAAGGATTCTCTGAAAGCTCTCGAAGCAGATATCCAACACGCTAACACTGTAGCTTTAGATTATCCT
CGGGAGAAGGATGGAGCTCGTGTTCAGATGAGGCTATCTTACAACCCGGCAGCTCAGTTTTTACTCTTTCTTGTCCAATGGACTGATTGCCACC
TGGCCGGTGCACTCGGTTTGCTCAGAGTTCTCATTTACATGACCTATGCGGATGGGAAGACCACAATGTCGGTTTACGAGAGAAAAACCAGTAT
TAAAGATTTCTATGCTGTGATATTTCCATCGCTGTTGCAACTAGAGAGGGGCATCACAGACGTGGATGACCGCAAACAGAAAGAGGTCTGCAAA
GTAAGGTACAGGAACAAAGAGGAGATGGAAAGAGTAAAGCTCTCGGAGATTGACGTGGAGAGAGACGAAGAGTGTGGTATATGTATGGAGATGA
ACAGCATGGTTGTTCTTCCCAACTGTACACATTCTTTATGCATCAAGTGTTACCGTGACTGGCATGGGAGGTCAGAATCATGCCCTTTCTGCAG
GACAGTCTGAAGAGAGTGAACTCAGGGACCTGTGGATGTTGATGGAGAATCAGATACGTCAGTCTCCATACAGTGGAGAGGGAGAATAAGAAGA
GGCTGTTTGTGTACATAGAGAAGCTTCCTCTAGTGGTTCCAGATCAAGTGTTTGCTTCTTCTCCTTACGATTGCCATGTCAAGTGAGTAAGATT
AATAAGAAGAAGAAGAAGAGCTTTTATAAAAGGCTAAACCGGTTCTGGTAAACCTTTATATGAATGTATATATAATGTTTTTTTTTTTTTTTTG
TTCAAGTATATATAATGTTTTTAGAGTAGTAGTAAGTAAGTAAGTAATAATAATATAGTAACCATTCTCTTGGGGAAGTCCATT |
Primers for UN13649 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGAATTTGGGTGTGTGTGT |
59.855 |
20 |
ATGGAACGTCAATTTCCAGC |
59.939 |
20 |
120 |
81 |
200 |
| 2 |
TCGAATTTGGGTGTGTGTGT |
59.855 |
20 |
AACTCTTGCCATGGAACGTC |
60.119 |
20 |
130 |
81 |
210 |
| 3 |
TCGAATTTGGGTGTGTGTGT |
59.855 |
20 |
CCTTGAACGAAACTCTTGCC |
59.853 |
20 |
140 |
81 |
220 |
|
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