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Simple sequence repeat (SSR)
>UN13742
AGTTGATTTCGAACCCTAAGCTAAGGGGGTAAAGAGAGGTCTTTTCTCGGGAGACAAAACAGATAAACAGTGAGGGAGAAAGAAGGATGCAGAA
TCAGAGGCTGAAACAACAACAAGCAATGATGCAGCAAGCAATGATGCAGCAACAACATCACTCTCTCTATCATCCTAGCCTCATGGCTCCTCCT
CCTCCTCAGATGGAGCCTCTGCCAAGTGGAAACCTTCCTCCTGGTTTTGATCCCAGCACTTGCCGTAGTGTGTATGCTGGAAACATCCATACGC
AGGTCACTGAGGTTCTTCTTCAAGAGATTTTTGCTAGCACCGGCCCTGTTGAAAGCTGTAAACTCATCCGAAAGGATAAGTCATCATATGGATT
TGTCCACTACTTTGATCAGAGATCTGCTGGTTTGGCTATCATGTCTCTTAACGGAAGGCATCTATTTGGACAGCCTATCAAAGTTAATTGGGCG
TATGCCACTGGTCAGAGGGAAGATACATCAAGCCATTTCAACATTTTTGTTGGTGATCTCAGTCCAGAGGTTACTGATGCAGCACTGTTTGAGA
GCTTTTCTGGCTTTAACACTTGCTCGGATGCAAGAGTGATGTGGGATCAGAAAACCGGACGCTCGAGAGGCTTTGGGTTTGTTTCCTTCCGCAA
TCAGCAGGATGCTCAAACTGCCATAAATGAAATGAATGGTAAATGGATAAGTAGCAGACAAATCAGATGCAACTGGGCGACAAAGGGTGCTACT
TTTGGGGAGGACAAACATAGCTCTGATGGAAAAAGTGTCGTTGAACTTACAAACGGCTCAGAGGATGGTAGAGAGATCTCAATCTCAAACGAAG
AAGCTCCTGAAAACAATCCTCAGTATACCACTGTGTATGTAGGAAACCTCGCTCCAGAAGTGACTCAGCTTGATCTACACCGCATGTTCCATGC
ACTTGGCGCTGGAGTGATTGAAGAGGTTCGTGTCCAGCGAGACAAAGGCTTTGGTTTTGTGAGATATAACACTCATGACGAGGCTGCTCTTGCT
ATTCAAATGGGCAACTCTCAGCCTTTCCTCTTTAGCAGACCCATAAAGTGTTCATGGGGAAGTAAACCAACACCAACAGGCACAGCCTCAAACC
CACTTCCACCACCAGCGCCGGTTCCAGTCCCTGGTTTGTCCCCAATGGACCTCTTAGCGTATGAGAGGCAACTGGCTCTAGCCAAGATGCATCC
TCAGGCTCAACATTCTCTGAGGCATGTAAATGCAGCTGGAGCAAGTGCAGCTATGTACGATGGTGGGTTTCAGAATGTAGCTGCGGCGCATCAG
CAGCTCATGTACTACCAGTAATATACTCTGGTCTCTTTGACCTGATGAGATGCTTTTTTCTATCTATTTTTTTTTCTTTTTCTCTTCCTACTTA
ATTTATCACTTTCTTGCTTTTTTTCTAGACCTTTTTCAGAGTCTTATGTATGTGTGTCTGTCATTTGAAGTCGTTGATTCTATATATGCTTAGA
ATGACATGAAATAAAAGGGATGTTTGTTTGGATTCCAAATTTGCTTGGGTCCTAAACATGTTTGAGAAGGGTTTGTGGTTCTGTAGTAGTAGTG
AACCTAATCGAAGTATTTTGACTTTAAATTCTTACGGGTTAAATAAATTGAATTTTAATCC |
Primers for UN13742 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACAAGCAATGATGCAGCAAG |
60.019 |
20 |
AGAACCTCAGTGACCTGCGT |
59.907 |
20 |
186 |
113 |
298 |
| 2 |
ACAAGCAATGATGCAGCAAG |
60.019 |
20 |
CAGTGACCTGCGTATGGATG |
60.136 |
20 |
179 |
113 |
291 |
| 3 |
ACAAGCAATGATGCAGCAAG |
60.019 |
20 |
CTCAGTGACCTGCGTATGGA |
59.855 |
20 |
181 |
113 |
293 |
|
|
