 |
Simple sequence repeat (SSR)
>UN13808
GTAAAACTTGTAATCAGATTATATTTACAAACAGAAATTATGTCAAAAAGGTAAATCAATATTCTTTCATCTTGTTTATAACATAGGAACATGT
TTCTACACAATTAAAAAAAAAGATAAATAGAGTTGCAAGTTCAGAAAAAAAAGGAAGGAAGATTAAGGATTTTTCTGCTGCTTCTCTATATCAT
ACAGTACACAGACATCTGCAGCTGTTTTCATCTGAATGATATTGACTGTTTGTTTCATGGACCAACCGAATATTGTCAAAGCTAGAAGAAGAGA
AAGTGGTGAAATCTGAGTTAATGTGGAAACTACGACATTCAGGAGACTTTCGGTTTGGTTCTTTGCAATGAGAAGAAGGATGATATATAGAACC
TCGCAAGAAACACAGCAATAGCACATGAAGATCCGGTTTCCATAGTAGAGTCTGAAAAGCCAGCTTGTGCTGTCTTTCACATCCTTATGGCTGC
TCTTCCCTGCTAGAAACGTACTGTACATCTGCAGCCAGTGACTAGCAATATCTAAAGCCAGCAATGAAAGGAAGACCAAGCTAGGCCTGTAGAC
TTGAGAGAGAATCACGAGTAGACATGCCGTGCTGACTCTATCTGTGACCATGTCGAGAACAGCTCCAAACGTTGAAACTTGGTTGAATCTTCGA
GCACACCAGCCATCCACAGCATCGCAACAAAAGCTGAAGAAATAGAGGAGGGAGAAAAGTGTTTTGTTAGAGAAACAGACAGCAAAGGCAACAC
AGTTCAAGAGAGCTCTCATGTACCCAACAATGTTAGGTATATAAAGGTAAACAGACAACTTCTCTGGTCTTGGTCTCTCCTTCTTCCCCATTTT
TTTTTTTGACTCTGATGTTACGCAAATCTCTCTTACGATCCCACACTTGGAAACGGGATTAGAGTTGTGGTGATCTTGAAGTGAGAGAGGAAGA
GATCTGTATAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGTTAAACAGAGGCTCGCATGTTCTTCAATGCCC |
Primers for UN13808 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCAAAGGCAACACAGTTCAA |
59.888 |
20 |
AAGAACATGCGAGCCTCTGT |
60.02 |
20 |
268 |
740 |
1007 |
| 2 |
ACGATCCCACACTTGGAAAC |
59.827 |
20 |
AAGAACATGCGAGCCTCTGT |
60.02 |
20 |
127 |
881 |
1007 |
| 3 |
GCAAAGGCAACACAGTTCAA |
59.888 |
20 |
ATTGAAGAACATGCGAGCCT |
59.843 |
20 |
272 |
740 |
1011 |
|
|
