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Simple sequence repeat (SSR)
>UN13821
GGGGTGGTTGGGTTGTTTCGTTTCCATCCACTCTTTCTCTCTTGTTTGTTTCTTCCTCCAGCCCTTCGCCAGACCATCAAGGAGGGAGGACAAC
AAAAGCTTAGCTTTTTTTTTGGGGGTTTAATCAATCAAAGAAGAACAGATTTGAATTTTTATTGGGTCTTCAGAGAAGAAGAAGCAGAGACATT
TAAAAAGGAGGGAAGACAATGGAGGAAACAATGGCGGCGAGGTATTGGTGTCACATGTGTTCACAGATGGTGAACCCCACAATGGAATCCGAGA
TCAAATGCCCCTTTTGCCAAAGCGGATTCGTCGAAGAAATGAGCGGTAACGGAGGATTAAGAGACGTGCAAGACCCAGAAACGGAGTTTGGAAC
AACAGACCGTGCCATGTCTCTATGGGCACCAATCTTGCTCGGGATGATGAGCAGTCCTCGTAGACGAAGAAGGTTCAGAAGAGCAGAGCTCGGT
TCAGAAGAAGAAGACAATGAAGACGATGATGATGTTGTTGATCGTCATCATCATCATCATAGAGCTAGAAGACACGGTGGAGAGATTGATTTGG
ACAGAGAGTTCGAATCTATCTTGAGGAGAAGACGGAGAAGCTCGGGGAATATACTGCAGCTGCTTCAAGGGATACGCGCAGGGATTGCTTCTGA
GTACGAGAGCTCTGATAACAACGAGAGAGTTATAATGATCAATCCTTATAACCAGTCCCTCGTTGTGAGAGGATCTTCTGATCAGACTCAGACC
CATTCTGCGTTGACTTCGCTTGGAGACTACTTCATTGGACCTGGTTTGGATCTCTTGCTTCAGCATTTGGCTGAGAACGATTCCAACAGGCAAG
GGACTCCGCCTGCTCGTAAAGAAGCGGTCGAGGCTTTGCCGACGGTTAAGATAACAGAGCCTTCGTTGCAGTGTTCGGTTTGTTTGGATGATTT
TGAGAGAGGCGTTGATGAAGCGAAAGAGATGCCGTGTAAGCATAAGTTTCATGTCAAGTGTATTGTCCCGTGGCTTGAGCTTCATAACTCGTTT
CCCGTGTGTCGGTTCGAGCTTCCTTCTGGTAATGATGATGGTGATGGTGAGAGTAAGGTTGAGTCAGGGGGAGGAGCGAGGACGAGAAGTGTTC
CTGAGAGTAGTGACAGAGAGGTTGTTGAGAATGTGGGGGAGAGAGGAAGAGAGGATGATGTGAGGAGTGGGAATGGGAGAAGGTTCTCGATTCC
ATGGCCGTTCAGTGGTTTCTTCTCTTCTTCTTCTTCTTCCTCGTCTTCTTCTTCTTCGGCATCTGGATCATCTGGGTCTGGTGAGAACAATGTC
TACTCAAGATCTTACGGTTCTTCTCGCTGATAAGACATCCAACAAATAAAAAAGATCTTGGTTCTGTTGTTGTTGTCTTGTATTTTCTCATGTT
CTAGCTCTTTGATTTGTTTCCTTCTCTGCATTTCATTTTGCTGCTTTGTATGTACATAACAATGATGTTCTTTTACTCATGACTGTTTAAAAAA
ATTCCATGGAGGTATGTTTTTCTTCGTTTCATTGTTGCTGTTGTACATAATCAAATTGGGTTTGTGTGTTTTTGGTTAATACTGTTTTTGTTAT
TGTAATTGTGTCTTGTATATCAAACTTATGTCT |
Primers for UN13821 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGCAGAGCTCGGTTCAGAAG |
59.891 |
20 |
TCCTCTCACAACGAGGGACT |
59.835 |
20 |
274 |
458 |
731 |
2 |
AGCAGAGCTCGGTTCAGAAG |
59.891 |
20 |
GATCCTCTCACAACGAGGGA |
60.199 |
20 |
276 |
458 |
733 |
3 |
AGCAGAGCTCGGTTCAGAAG |
59.891 |
20 |
GCAGCTGCAGTATATTCCCC |
59.696 |
20 |
170 |
458 |
627 |
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