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Simple sequence repeat (SSR)
>UN13835
GGAATCTCTTCGAACGGTTCTTAATTTTCTCGACGAGATCTCTCTCTCTCTCTCTCCACCTTCCACCACCGTGCGGAGAGGGATGTCGAAAGCT
CGTGTTTACACCGACGTCAACGTGATCCGACCCAAGGAGTATTGGGATTACGAGTCTCTCAACGTTCAGTGGGGGGAGCAAGATGATTACGAGG
TTGTCAGGAAGGTGGGGAGAGGCAAATACAGTGAGGTGTTTGAGGGGATTAACGTGAACAACAACGAGAAGTGCGTTATCAAGATTCTCAAGCC
TGTCAAGAAGAAGAAGATTAGAAGAGAGATTAAGATACTTCAGAATCTCTGTGGAGGGCCAAATATTGTCAAGCTGTTTGATGTTGTGAGAGAC
CAACACTCAAAAACACCAAGCTTGATATTTGAGTATGTTAACAGCACTGACTTCAAGGTTCTGTATCCGACTTTGACTGATTATGACATCCGTT
ACTACATCTATGAGCTGTTGAAGGCGTTGGACTACTGCCACTCGCAAGGTATAATGCACAGAGATGTCAAGCCACACAATGTCATGATTGACCA
TGAGCTCCGCAAACTTCGCTTAATTGATTGGGGTCTCGCTGAGTTTTATCATCCTGGAAAAGAGTATAACGTCCGTGTGGCCTCAAGGTACTTC
AAGGGACCGGAACTTCCAGTGGATTTACAGGACTATGACTATTCCTTGGACATGTGGAGCCTCGGTTGCATGTTTGCTGGGATGATATTCCGCA
AGGAACCTTTCTTTTATGGCCATGATAACCGATGAACTGAATGCATATCTGAATAAGTATCAGTTAGAACTTGATGCCCAACTAGAGGCACTTG
TTGGGAGACATAGCAGGAAGCCTTGGTCCAAGTTCATCAATGCTGACAATCGCCATTTGGTCTCACCTGAGGCGATTGATTACCTCGACAAGCT
ACTGCGGTATGATCATCAAGACAGGTTAACTGCAAAAGAAGCAATGGCTCACCCTTATTTCGCGCAAGTCAGGGCAGCAGAAAGCAGCAGAACG
AGAACTCAGTAGAGATGTTTTCTGAGTATGTCAAAGTGACGTGATGTTATGGTTATTGTTTTCTTTAAAGAAGTGATGTCACTGCCTAATCCTA
AAAGTTTATCAGATATTCTTGAGACTGCTTTCATGTATTTTCAAACTTGTAGAACTATATTGGGTTTAAAACCTCTATCAAGTCGAATTTAAAA
ACATAACAAGTCGATATTTTAC |
Primers for UN13835 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGGTTCTTAATTTTCTCGACG |
58.886 |
21 |
CCCCTCAAACACCTCACTGT |
60.002 |
20 |
221 |
15 |
235 |
| 2 |
CGAACGGTTCTTAATTTTCTCG |
60.121 |
22 |
CCCCTCAAACACCTCACTGT |
60.002 |
20 |
225 |
11 |
235 |
| 3 |
CGGTTCTTAATTTTCTCGACG |
58.886 |
21 |
ATCACGTTGACGTCGGTGTA |
60.032 |
20 |
106 |
15 |
120 |
|
|
