 |
Simple sequence repeat (SSR)
>UN13887
TCTTCTTCCTCTGTCCTTTTTCTTCTCTATCAGGCTTCAGTAAGCAATGTCAGTGGTTTTAGTCTCTTCAGCTTCAGCTTCAGCTTCAGCTTCA
GCTTCAGCGACACACACAAAATCTAATTCCATAAAGATTCCCTTTTTATCTCCCCCGTCCAGAGTCTCGATTTCTCCTCGAAGATGGAAACTTC
TCGACAGCCCTCTTCGCGTGGCGGCCCCACCTTCGTCAGTACCCACTTCAGATCCGGCTGAGGAGAGTCGGTTTGAAGATGAGTACGGCGGAGA
GAAGGAGGAAGAAGGGTCTGAGTTCAAGTGGAGAGATCACTGGTATCCGGTTTCTCTTGTCGAAGATTTGGATCCGAATTCGCCAACCCGGTTT
CAGCTCCTGGGTCGAGACCTCGTCCTCTGGTTCGATCGGAACCATCAGAAATGGGCCGCCTTTGATGACCTCTGCCCTCACCGCCTTGCTCCTC
TATCTGAAGGAAGGTTGGATGAGAACGGACACTTGCAATGTTCATATCATGGATGGTCTTTTGCCGGGTGTGGATCTTGCACTAGGATTCCGCA
GGCTGCTACTTCAGGTCCCGAAGCTCGCGCTGTTAAATCTCCCAGAGCTTGCGCTATTAAGTTCCCAACAAAGGTGTCTCAGGGTCTTCTCTTT
GTTTGGCCTGATGAAAATGGATTTGATAGAGCAAACTCCATTGAGCCCCCTAGGTTGCCGGATGACTTCGATAAACCGGAGTTTTCAACGGTGA
CAATTCAAAGGGATCTTTTCTACGGATATGATACTCTCATGGAAAACGTATCTGATCCTTCCCATATCGATTTTGCTCATCACAAGGTAACAGG
AAGAAGAGACAGAGCCAAACCATTGCCCTTCAAGGTAGAATCAAGTGGTCCTTGGGGTTTCCAAGGTGCCAACGACGACAGTCCAAAGATAACC
GCAAAATTCGTTGCTCCGTGCTATTCTCTTAACAAAATTGAGATAGATGCGAAGCTACCGATTGCCGGTAACCAAAAATGGGTTATATGGATTT
GCTCATTCAATATACCAATGGCTCCAGGGAAGACCCGTTCTATCGTTTGCAGCGCCCGTAACTTCTTCCAGTTCTCTGTACCAGGACCTGCTTG
GTGGCAGGTTGTACCAAGATGGTACGAGCACTGGACTTCCAACTTAGTATATGACGGAGACATGATTGTACTTCAGGGACAAGAGAAAGTATTC
CTCTCTAAATCAATGGAGTCACCAGACTACGATGTGAACAAACAGTACACGAAGCTCACGTTCACTCCAACACAGGCAGACCGTTTCGTTTTAG
CTTTCAGAAACTGGCTCAGACGGCACGGCAAGAGTCAGCCTGAGTGGTTCGGCTCCACTACAGCTTACCAACCTCTCCCTTCCACTGTCTTAAC
CAAGCGCGAGATGCTGGATAGGTTTGAGCAGCATACACAAGTGTGTTCCTCTTGCAAAGGAGCATACAACGGTTTCCAAACCCTGAAGAAGTTT
CTTGTCGGAACCACGGTTTTCTTGGCTGCCACGGCTGGTGTTCCTTCAGATGTCCAGATTCGGTTGGTTCTCGCCGGTTTAGCTCTGATTTCAG
CTGCTTCTGCTTATGCTTTACATGAAAAAGAGAAGAACTTTGTGTTCAGAGATTACGTGCATTCTGAAATCGAATAGATACGTATAATCATTAT
ACAACTTTTGTAAAATCAAAACCATAGCAACTTCTAGTAAATTTATAGTATCACCACC |
Primers for UN13887 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAGGCTTCAGTAAGCAATGTCA |
60.44 |
22 |
TCTCTCCGCCGTACTCATCT |
59.973 |
20 |
254 |
31 |
284 |
| 2 |
TCAGGCTTCAGTAAGCAATGTC |
59.522 |
22 |
TCTCTCCGCCGTACTCATCT |
59.973 |
20 |
255 |
30 |
284 |
| 3 |
CAGGCTTCAGTAAGCAATGTCA |
60.44 |
22 |
GAAATCGAGACTCTGGACGG |
59.803 |
20 |
138 |
31 |
168 |
|
|
