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Simple sequence repeat (SSR)
>UN13892
GAAAGACAACTGTATTGAATTGAATTGATCAAGATTTCAAGATCTTAACTAATACATATTGTAATATTCTTCTACATGTGAAAGCTCATCTCAC
CAAACCTGCAACTAATAAAAAAACAAAACAAAACAACAGAAGAACAAGAGGAGGAAGGACACAAGAATGTACACATTACAAACACAAAAGACAA
ACACAACATTCTAAGAAAACACACCAAACTAATTCTTGGCTTCTTCATCAACAACAGCTGCGGCTTTCATCACAACGATATCTGATTTATCATT
ACCACATTCCTCAGGAACCACTGCCATCGACCGCCTATTACCGCATATTGTCCAAAGATATAACGCAAACATGGCACCTAAAGTTCCACAAACA
CCACCTAGAACCAATGCACTGAACATTCTCCAAACACACTTGCTCTTCCCCTTCCCCTTCACTTCCACTGTCTTCCTCTCCTCATCCTTAACAG
TCTTGGAAACAACTGCGTTTGGATCAAGGGGCTGCGAGTGAATCCTCATCGAAGGATGCCTCAGCTTAAAGCTCCATGAACGTAGATAATGTGG
CTTGGAAGAGTTTCCATTTGCAGATGTCAAACCCACCATGAACTTCTTCTCTTTCCATATCTTACCCAAATCTACCGAGTAAGAGATGAACGGA
TCCACCGGCTTCAAGTCATCTGATAGACTCAGACGACCTCTATCTCTAGAGCTTGCTCGTAATCAATCCAGCAACTCACTTCATCGAAACCGCC
ACCGAAAGATGATAAGTTTCTAATTCTAGCGGATTGGGGTCGACCGACTAAGACCCCAACACGGTTTCCTCTCTTGGAGACACCGAACTCGACA
GCGACAATCTCGTTCCGCGACAAGAAACCTAGACCAGAGGAGGAAGTGTTGTTGTCCTTTCTAGCAAACAGCCTAAGATCCAAACCGGATGGAA
CCATTACAAAAGACAGGACACTACCGATCTCTCTGGAGGAGGACATCATGGAGAAGGAGAAGCTAGTGGAGAACGATCCCGAAAAGTTTCTTCT
TTCTTTAGTAGTACCTTGGAATAGTTTGATGGGTTTCTTGTAAAGGACCCGTCCTTCGCTCCGAGTCACTGAGCCGGTCAGCTGAATCGACGAA
CCGCCGCCGCCGTTGACAAGGAGCTTGGAATCTCGAAACAGAGCAATGTTGTTGTCAAAGGAAGGAGATTTCGCAAACCCGTTAAAGGAAAACG
AGGAATCTGCATCTGCCGTGGTTTCGAAGGTTAAGACGAAGAGAAAGGCTAGAGCTTTGAGAAACGCCATAGCTGAACTGTAAAGGAGCTCTGT
TTTCTTCTTCTTCTTCTTCTGAATGGAATTTCTCAAAAAAGTAAACTTTAATATTTAATTAGTAGAGAAAGAGAGAGAATGTGTGTGTGTGGGT
GTTTGGTGCAGAAAGGAAACTGAAGCAGATGGGAGAAATTAAAGTAGAATTTTAAAAAGTCATCTTCTTCTATGCGAGGAGAAGAACCTTTGAT
TCCCTCTCCCTCTCTCCC |
Primers for UN13892 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GATTTCGCAAACCCGTTAAA |
59.943 |
20 |
TCCCATCTGCTTCAGTTTCC |
60.195 |
20 |
250 |
1195 |
1444 |
2 |
GAGATTTCGCAAACCCGTTA |
60.074 |
20 |
TCCCATCTGCTTCAGTTTCC |
60.195 |
20 |
252 |
1193 |
1444 |
3 |
CCGTGGTTTCGAAGGTTAAG |
59.604 |
20 |
GAGGGAGAGGGAATCAAAGG |
60.008 |
20 |
279 |
1238 |
1516 |
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