 |
Simple sequence repeat (SSR)
>UN13949
GGGTAGTAGCCACTCCAACTTTTCCGCCGTCGTCGTCGTCGTCGGAGAATACATCAGAAGGAAGGTTGAGGGAGATGGAGAAAGTAAAGATTGA
AGAAATACAGTCCACCGCTAAGAAACAGCGGATTGCTACTCACACTCATATCAAAGGCCTCGGCCTCGAGCCAACCGGGATTCCTATACCCTTG
GCGGCTGGATTTGTCGGTCAACTCGAGGCTAGAGAGGCAGCTGGTCTTGTTGTCGACATGATCAAACAGAAGAAAATGGCTGGCAAGGCTCTTT
TGCTCGCTGGACCTCCCGGAACCGGGAAAACTGCTCTGGCTCTTGGAATATCCCAAGAGCTGGGAAGTAAGATTCCCTTTTGTCCAATGGTTGG
ATCTGAGGTTTACTCATCAGAGGTTAAGAAAACTGAGGTTCTCATGGAGAATTTTAGACGTGCCATTGGTCTACGTATCAAGGAAACCAAAGAC
GTCTACTAAGGAGAGGTTACGGAGCTGTCACCAGAAGAAACTGAAAGTCTTACCGGAGGTTATGGCAAAAGCATCAGTCATGTTATCATTGGAC
TCAAGACAGTCAAAGGAACCAAACAACTTAAGTTGGATCCCACTATCTACGATGCCTTGATTAAGGAAAAAGTAGCTGTGGGGGATGTTATATA
CATTGAAGCAAACAGTGGAGCTGTCAAGCGGGTGGGTAGAAGCGATGCTTTTGCCACTGAATTCGATCTAGAAGCAGAAGAATATGTTCCACTT
CCCAAGGGAGAGGTTCACAAAAAGAAAGAGATAGTGCAGGATGTGACGCTTCAAGATCTGGATGCAGCAAATGCTCGGCCTCAAGGTGGGCAGG
ATATACTTTCTTTGATGGGCCAAATGATGAAACCCCGGAAGACTGAGATCACTGATAAGCTGCGCCAAGAAATTAACAAGGTTGTTAACCGTTA
TATAGATGAAGGTGTTGCAGAGCTCGTTCCCGGAGTTCTATTTATCGATGAGGTTCATATGCTTGATATGGAGTGCTTTTCTTACTTAAACCGT
GCGCTGGAGAGCTCTTTATCTCCAATAGTGATATTTGCAACAAATAGAGGAGTCTGCAACGTTAGAGGGACTGATATGCCTAGTCCACATGGAG
TCCCTATTGACTTGTTGGATCGGTTGGTCATTATCAGGACTCAAATCTATAATCCCTCTGAAATGATACAGATTATAGCCATTCGTGCGCAAGT
AGAAGAGCTAACGGTGGATGAAGAATGCTTGGTCCTACTTGGGGACATTGGGCAAAGAACATCTCTAAGACACGCTGTTCAGCTGTTGTCTCCT
GCCAGCATCGTGGCGAAAATGAATGGACGTGACAACATCTGCAAGGCTGATATAGAGGAAGTAACATCACTCTACCTTGACGCCAAATCTTCAG
CAAAGCTTTTACACGAGCAACAAGAAAAATACATCTCATGAGAAACCGTAATCGAATGTCTTATCAAAAGATTTGCATGTGTGCTCTGGTTGCT
TCTCTTTCTAGCTATTTTGTAATGCATGTGACGATGGAGAAATCTTAAATTTGATGGGAGAGAATTGGCTTCTCTGAGACCAGAGTGGTGGTGA
TTCGGATGTATCTTCAGTGTAAGCCTTGGTTATTTACCTACATTAGTTGATCTTTGAGTTTCCTGGTTCCATAATAGATCTAGACCAATTCTTC
AAGAACAAACAACTTGTAAAAAAGTCTATTATCAAAAGATATTACTGGGAACTGGAGTGCAGTGTGAGGGTCTCTTTGATTCCTACGGTAATAT
CTGTAACAGAACGCTTTTGGATCTGATAATGATTTCAAGTTACAAGTCTTGACGTAAGTAGTGTTATTAAATATTATACATAAACTCCAATAAG
TCTTTTGACGTCGAACGTTGGTCTCTCTCACTTTTTGACGGTCTCATCTTTGGTTGCCTCGGACGTGAAACTGACCGCTTTTCTCGGATGCTCC
CTTATGTTCAAGCTAAACACTTCAGGCCTCGAGTAATGACCCACCACATCGAAGTCGAACTTAGCTCGTGCTATGTCCCCAAGATCTAGATCAG
CTGAGATAAGAGCCTCTCCTTCATAGTTTGGTCCAGCTAGAACAATCCCTAAAGGGGAAATGATAGAGCTTCCACCGGCACAGACAACAGAATC
AGGTGTAAGGCTCTCTTCTGAACCGGAAAACGTGTATTCCGGTGGAGGAGGATAGTCTTTCCGGCGACAGAACTGGTTAGATGATAAAACAAAA
CATCCACCTTCGAGAGCGATGTGAGTCATCGACGCTAGCCAAGTTTCTCTAGCGTCAGCAGTAGGTGCACAATATATCTCAATGCCTTTGGCAT
ACATTGCGGTTCTCAAAGAGGGCATCCTATTCTCCCAACAAATAGCAGCACCGATTTTACCAATAGGAGTATCGAAAACAGGGATGGTTGATCC
ATCTCCGAACCCCCAGATGCAACGTTCAAGAGCTGTAGGCATGAGTTTCCTGTGCTTACCCAAGAACTGACCTTGCGAGTCAAAGAAAAGGACA
GAACAGTATAGAGTATAGCCTTCCCTCTCTATCACACCCATGACCAAGAACACTTTGTACTTCCTAGCCATCTCCGCCAAACGTTCCACTTCAG
GGCCGGGAATATCAATGGCAGAAGCAAGATACTTGCGAAAGTCGTCTCTTCCTTTAGCCGTCCGAGCACCAATGGCCAGCTCGAAGCTTGAGCC
GCGAGGATATCCGCCGATGAACGCCTCCGGGAACACAACGAGCTGTGACCCATTATCCGCCGCCTCGGCAAGTAACCTCTCCGCCTTGTCTAGG
GTGGCGGGAGTATCGTAGAAGATGGTGCATGCCTGGACGACGGTTGCTCGTACGATGGAGGAGGAGGAGGAGTCGCCGGACATGTCGATCTCGG
GGAAGGATTGATCGACGTTGATTGGAGGAGTGGCCGTGACGAGAGACATATCTTGGTGAGTGGACATGGAAGGAAGGAGCTTCC |
Primers for UN13949 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GGGTAGTAGCCACTCCAACTTTT |
59.947 |
23 |
GCAATCCGCTGTTTCTTAGC |
59.988 |
20 |
130 |
1 |
130 |
| 2 |
GGGTAGTAGCCACTCCAACTTTT |
59.947 |
23 |
CTAGCCTCGAGTTGACCGAC |
60.012 |
20 |
220 |
1 |
220 |
| 3 |
GGGTAGTAGCCACTCCAACTTTT |
59.947 |
23 |
GCTGTTTCTTAGCGGTGGAC |
59.882 |
20 |
123 |
1 |
123 |
|
|
