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Simple sequence repeat (SSR)
>UN01411
GGAGATCAACCATTAATCTCACCACAGTTTCCTTGTTTCTAGAGAGAGAGAGAGAAGAAGATATCTCGTTTGTGAAAATGGTTGATGTGGCCGA
CAAATTAGGTTACTTCCAAGCGATCACAGGCCTCGAAGACCCCGATCTGTGCACGGAGATCCTCCAAGCCCATAACTGGGACCTCTAACTCGCC
ATCTCCTCCTTCACTTCATCCGATCAAGCAAGGGAGAGACAGAGGCAAGAAGAGGAAGAGCGTTTAGAGAGGGAAGCTGCTGAGGCAGAGAGGA
AACGCAAAGAAGAAGAAGAGGCTCGGGAGAGAGAAGCTGCTAGAGTGAGAATGAGACAAGAGAAAGCACTTGCTCTTGGAGACGAACCCGAGAA
AGGACCTGATGTTACACAAGTTTTGGTGAGGTTCCCGAATGGAGAAAGAAAAGGGAGGAGGTTTGAAAGCAATACCAAGATACAGACATTGTAC
GACTACGTTGATTCACTTGGGGTGCTGGAAACAGAAGAGTATAGCTTAATAACAAACTTTCCAAGAACAGTGTATGGAAGAGACAAAGAGTCAA
TGTCACTGAAAGATGCAGGTTTGCATCCTCAGGCAAGTCTCTTCATTGAGATCAACTAAGTTTCAGATTCTTCTGTTTCCTTCTCCTTTAGCCA
CTTTTTCAGTTCTTTTTTTACATCTCTTTTAAATAATTAGTAGTGTTGCTTCAGTGATCCGATGAACAAGATAACATATATACACTCGTATATT
CAGAAGTTGTGTCAGATAATATTTGATATATTTATTTCTTAAAATGGTTTCGCATTGTATTATTT |
Primers for UN01411 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCATTAATCTCACCACAGTTTCC |
59.755 |
23 |
AGAGGTCCCAGTTATGGGCT |
59.957 |
20 |
171 |
10 |
180 |
| 2 |
CCATTAATCTCACCACAGTTTCC |
59.755 |
23 |
GTCTCTCCCTTGCTTGATCG |
59.95 |
20 |
219 |
10 |
228 |
| 3 |
TCTCACCACAGTTTCCTTGTTT |
58.744 |
22 |
AGAGGTCCCAGTTATGGGCT |
59.957 |
20 |
164 |
17 |
180 |
|
|
