 |
Simple sequence repeat (SSR)
>UN14024
GGAATCCTCAAAAAAGAAAACACTTCCATCATAAACCAGAGAGAGAGAGAGAAAGAATAAGAGAAAGAGAGATAAAATGGCGTACAGCGCGTGT
TTCCTACACCAGAGCGCACTAGCCTCCTCAGCCGCACGATCATCGTCTCCCAACTCATCCCAGCGCCACTTGTCACTCTCCAGACCCGTCCAGA
TAGTCTGTAAAGCCCAACAACACCATGAAGAGGATAACTCCACTGTCTCTCGCCGTCTAGCTCTCACACTCCTCGTTGGCGCCGCCGCCGTCGG
TTCCAAAGTGTCTCCCGCTGAAGCAGCCTACGGTGAAGCTGCTAATGTGTTTGGGAAGCCAAAGAAGAACACAGACTTCACTGCATACAGTGGA
GATGGATTCATTGTGCAGGTGCCAGCTAAATGGAACCCAAGCAGAGAGGTAGAGTATCCAGGACAAGTCCTTAGGTACGAAGACAACTTTGACG
CCACTAGCAATCTCAATGTCATGGTCACTCCTACTGACAAGAAGTCCATCACTGACTACGGTTCCCCTGAAGAGTTCCTCTCTCAGGTCAACTA
TCTCCTAGGTAAACAAGCTTACTTTGGTGAGACTGCCTCTGAGGGAGGTTTTGACAACAATGCAGTGGCGACAGCAAACATTCTGGACACAAAC
ATTCAGGACGTTGGTGGGAAGCCATACTATTACTTGTCAGTGTTGACAAGAACAGCAGATGGAGACGAAGGTGGTAAGCATCAGCTGATCACAG
CCACCGTGAATGGAGGGAAGCTATATATCTGCAAAGCGCAAGCTGGAGACAAGAGGTGGTTCAAGGGAGCCAATAAGTTTGTTGAGAAAGCAGC
CACTTCTTTCAGTGTTGCTTAAATTGAAAAGCAACACAACAGAAGAGTCCTCTGTTTTTCTTTTGAAACTAAGCTTTTGAGAACTATCTAGATA
ATGATGCTACCTAGGAAGCTTCACCTGTGTACCTGTGATAACAGAACTCATTTGCAATAATGATATTATTAATTAATAGTCAAAAGTCTTTGTT
ATCTGTCTGTCACCAAAATGGAAACTCTTATAAACTTTGACATGATCTCTCCTCTTCTAGCACAACAAAACTGTGTGCAAAATCAATCATCCAA
CAAATGAAACATAATATCATCTTTTATAGTAAAGTTTCAAATGAAAGAAAAAGTTTCAAGATTCTGGTGCTGGTGCTGGAGAGGGAGGAGCTGG
AGCTGCAAGTTTGAGGAGCGGCTGCAGAGCTTTCACAACTATGCTCATATTTGGTCTAAACTCAGATTCATATTGCACACACAATGCTGCCACT
GCTGCTAGCTTAGCAAATGCTTTCGGAGGGTAATCCGCTTTTAGCTTTGGATCAATGCATTGTTTGACTTGATCTTCACTGAGTCTTGGTGTCG
CCCAAGTTACAAGACTTTGTTGACCACGAGGCATGGTGTGGTCCACAGGTTTCCTCCCTGTTAGGAGTTCTAGAAGAACAACCCCAAAGCTGTA
CACATCACTCTTCTGAGTCAACTGTCCAGTCATTGCATATTCTGGAGCATGATAACCAAAAGTTCCCAAGACTCTTGTTGAGTGAAGA |
Primers for UN14024 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAAAAGAAAACACTTCCATCATAAA |
57.538 |
25 |
GAGAGCTAGACGGCGAGAGA |
59.997 |
20 |
243 |
11 |
253 |
| 2 |
AAAAAGAAAACACTTCCATCATAAA |
57.538 |
25 |
TGGTGTTGTTGGGCTTTACA |
60.004 |
20 |
203 |
11 |
213 |
| 3 |
AAAAAGAAAACACTTCCATCATAAA |
57.538 |
25 |
AGCTAGACGGCGAGAGACAG |
59.914 |
20 |
240 |
11 |
250 |
|
|
