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Simple sequence repeat (SSR)
>UN14080
GGAGAGACTCAGTGACCATTTCTATAATCTACCAATCTCTCTGACGCTCTTTCTGCTCCGGTGTCTCATCGTCACGTCCGGCGCATTTCGTGGA
AGCAGAAGAGCCTATAAAGTTTTTTTTTTCGGAGCTCATGGACAGCTTCTGGCAATTGGGTGATGAGCTACGAGGTCAGACTCAGTCACGAGCA
TCAGAGGATCACAAATGGTCCACCGTCGCAACCAAGCTCGCTGAGCAGACAAGGATGAAAAGCGAAAGGTCGAACAACCTCGATCTCTCCAAAG
CTGGTTACTCCGAGTTCAGACCATCCGACAAGCTTAGTTTCCACGACAACAACAACAACAACTTCAGCTTAACGTGTTTAACAACAGCAATGTT
TACAACAACATGAATGCTGCTGTTTTCCAGAAGAATGATTTCTTCAAAAGTGGAGGAGGCAACACGAAGGTTAACAAGTATAGTGGTAATGTTG
TTGCTAACAAAGAGCTGAGCAAACACAACAACAGCAATGATAATGCTGTTGACAAGAGGTTTAAGACTCTGCCTGCGTCGGAGACGCTTCCGAG
GAATGAAGTTCTTGGCGGGTACATCTTTGTTTGTAACAACGATACCATGGAGGAGGACTTGAAGCGTCACCTCTTTGGGTTACCTCCAAGATAC
AGGGACTCTGTGAGGGCAATAACACCCGGATTGCCTCTGTTTCTTTACAATTACACCACTCACCAGCTCCATGGTATCTTTGAGGCAACAACTT
TTGGAGGTACTAATATAGATGCGACTGCTTGGGAAGACAAAAAGTGCAAAGGAGAGTCAAGATTTCCCGCGCAGGTGAGGATCAGAGTGAGGAA
GATCTGCAAAGCCTTGGAAGAGGATTCCTTCAGGCCTGTTCTTCACCACTACGATGGTCCAAAATTCCGCCTTGAGCTCTCTGTTCCCGAGACA
TTGGATCTGCTAGATCTCTGCGAACAAGCTGGTTCTCCATAAAGCCGATCAACCTTGCATTACCACGTTGCTAAGTGGCGGAGTGGCGTTCTGT
CTGAAATCTATATCTATATATATATATGCATAGTACCGTAAGAGCGTAAGCTTGTGGGATTTAGTTAAGAGTCATGTATGGTTTACTAAGTGAG
GAGTGTGTGCGTCTTAGCAAAAGGGTGAAGAGGCTCCGGGGAATAAGCGCACGACTCTCAGTTCTTGTTGTGTCTCTAATGTGAGTTTGTCTCT
GTGTGTTGTGAGAGATTTGATAACTCCTTTGAAACATAAGATTTTATGTAGAAGAATATATATAGAGAGAAAGTGAGAGTAAACAACAGAGCCA
GAAACAATGGAATGAGCTTCTGTTTGTGTTTGCTTGTGTAAGGAAAGTTTAAACAAATGTTGTTGTGTTTCATTGAAAGGAGTTAAAATACGAA
AAAA |
Primers for UN14080 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCGATCTCTCCAAAGCTGGT |
59.95 |
20 |
CTGGAAAACAGCAGCATTCA |
59.988 |
20 |
139 |
268 |
406 |
2 |
TCGATCTCTCCAAAGCTGGT |
59.95 |
20 |
CGCAGGCAGAGTCTTAAACC |
60.015 |
20 |
280 |
268 |
547 |
3 |
CGAGCATCAGAGGATCACAA |
59.942 |
20 |
CTGGAAAACAGCAGCATTCA |
59.988 |
20 |
224 |
183 |
406 |
|
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