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Simple sequence repeat (SSR)
>UN14252
GGGCAAACTTTTAACTTTCTCCGTTTTCGTCGTCAGAGACATCTCTCTCAATCCCCAAATCTTCGAAGATAGATTCAGATCGGAAACGGAAGAA
AGACTCTGTCTCTTCGACAGATCAACCAAAGGACAAGAGAGCCGATCACAACCACCACCACCACCAAAGCAAGCACCGTAAGAAGAGCAAGATG
GCGTCGAGAGACCAAGTCAAGGCGTCGCACATTCTGATCAAGCATCAAGGATCTCGCAGGAAGGCGTCGTGGAAGGATCCGGAAGGTAAGATCA
TCATGACCACCACCAGAGAAGCAGCCGTCGAACAGCTTAAATCGATCCGTGAAGACATCCTCTCTGGCAAAGCCAACTTCGAGGATGTGGCCAC
TCGTGTTTCCGACTGTAGCTCTGCTAAACGCGGCGGCGATCTAGGTCCATTTGGGCGAGGTCAAATGCAGAAACCGTTTGAGGAAGCAACATAC
GCATTGAAGGTGGGAGATATAAGCGAGATTGTGGACACAGACAGTGGAGTCCATATCATAAAGAGAACAGCTTGATGTTCTGTTTATCTCCTTC
AAAGCCTCCTCCTATCATGTACCAAAAGTTACCAGCTTTTTTGATTTACCGTCTCTTCTTTGACCAAAGATAGAAGATGGATAATAAGATAAAA
GGCTTTGTTTCTGCATCTTTATATGGATTTGATACAAACCAAACATATGATAAAGACAAGAAACTGTATCTTAGTTACTTCTCATAATTTCATA
ATAACGAATTTCTGTTGTGACAGTGACTTTGTATTATCATCTTTTAGTTTCTGTGTTATCAGC |
Primers for UN14252 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAGGACAAGAGAGCCGATCA |
59.95 |
20 |
GCTTTGCCAGAGAGGATGTC |
59.957 |
20 |
233 |
123 |
355 |
2 |
TCTCAATCCCCAAATCTTCG |
60.006 |
20 |
CTTACCTTCCGGATCCTTCC |
59.897 |
20 |
233 |
46 |
278 |
3 |
TCTCAATCCCCAAATCTTCG |
60.006 |
20 |
GCTTCTCTGGTGGTGGTCAT |
60.12 |
20 |
259 |
46 |
304 |
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