 |
Simple sequence repeat (SSR)
>UN14398
AGGGGAAAAGAAACCTGAAACCCACCCATCAGAGAGAGAGAGAGAGAGAGAGATCCGAGATTTAGAGAGAAGAGAGAATGATCGCAGACGGATC
AGGAGAAGACGAAGAGAAATGGCTCGCCGCCGGCGCTGCGGCTTTCAAGCAGAACGCATTTTACATGCAACGCGCTATTGATTCGAATAATCTG
AAAGATGCTCTCAAGTACTCGGCTCAGATGCTTAGCGAGTTGCGGACTTCGAAGCTTTCGCCTCACAAGTACTATGACCTCTATATGAGAGCTT
TTGATGAGTTGAGGAAGCTTGAGATTTTCTTCATGGAGGAAACTCGGCGTGGCTGCTCCGTCATTGAACTCTATGAGCTTGTTCAGCATGCTGG
TAACATATTACCACGCTTATATCTCCTGTGTACAGCAGGATCCGTTTATATCAAAACCAAGGAAGCTCCTGCCAAGGAAATTCTTAAGGATCTT
GTTGAGATGTGCCGTGGGATTCAGCATCCTCTACGTGGTCTCTTCTTGAGAAGTTACCTTGCGCAAATTAGTCGAGATAAATTACCTTATATTG
GTTCTGAGTATGAAGGAGATGCTGATACAGTCACGGATGCGGTGGAGTTTGTACTACTGAACTTTACCGAGATGAATAAACTTTGGGTCAGAAT
GCAACACCAGGGACCTGCTCGGGAAAAGGATAAACGGGAGAAAGAGAGGAGTGAGCTTCGTGACCTTGTTGGAAAGAACCTTCATGTGCTGAGC
CAGTTAGAAGGTGTAGACCTTGATATGTATAGAGATACAGTTCTTCCTAGAGTCTTAGAGCAGATAGTGAACTGCCGAGATGAGATTGCCCAAT
ATTACCTAATGGACTGTATCATTCAAGTCTTCCCCGACGAGTATCACTTGCAGACTCTTGATGTACTTCTTGGGGCTTGTCCACAACTTCAGCC
GTCGGTTGACATTATGACAGTGCTTTCACGTTTAATGGAGAGGCTGTCAAGTTATGCTGCCTTAAATACTGAAGTTTTACCTTATTTCCTGCAA
GTGGAAGCTTTCTCAAAGTTGAATAATGCAATTGGAAAGGTAATAGAAGCACAAGAAGACATGCCTATTCTGAGTGCAGTAACCCTGTATTCTT
CGCTTCTCAAGTTTACTCTTCATGTTCACCCTGATCGGCTTGATTATGCGGACCAAGTGTTGGGATCATGTATTAAGCAATTGTCTGGAAAAGG
AAAGATTCATGACACCCGTGCAACAAAGGAGCTTGTCACCCTTTTAAGTGCTCCTCTAGAGAAGTATAACGATGTTGTTATCGCCCTTAAACTA
ACAAACTATCCCCTTGTAATGGAGTACCTTGATAGCGAGAACAAGAGAGTAATGGCTACGGTTATAATTCGAAGCATTATGAAAAACAAGACTG
TAATTGCTACAGCAGAGAAGGTTGAAGCATTGCTTGAACTGATCAAAGGACTTATCAATGACCTGGATGAGCCTCAAGGTCTTGAGGTTGATGA
AGATGACTTTGAGGAGGAGCAAAATTCTGTTGCGCGTCTCATTCACATGTTATATAGTGATGATCCGGAAGAGATGTTTAAGATTATCAATGTC
CTCAAGAACCATCTCCTGACAGGAGGGCCAAAGCGCTTAAAGTTCACCATTCCACCCCTGGTTGTGTCTGCTCTGAAGCTAATCAGGCGGTTGC
CAGAGGAAGGATACAATCCTTTCGGAAAAGAGGCTTCGGTGTCTGCTACTAAAATTTTCCAATTTCTAAATCAGATTATTGAAGCGCTCCCTAG
TGCTCCATCATCACCTGACTTGGCATTCCGATTGTACTTGCAATGTGCTGAGGCTGCGAATAAGTGTGATGAAGAGCCAATTGCATATGAATTT
TTCACCCAAGCATACATCTTATACGAAGAAGAAATTTCGGACTCAAAGGCCCAGGTGACCGCTTTACAACTTATAATTGGAACTCTGCAAAGGA
TGCACGTATTCGGTGTTGAGAACAGAGATACTTTAACACATAAGGCCACAGGGTATTCCGCAAAACTTCTAAAGAAACCCGACCAGTGTCGAGC
TGTTTATGCCTGCTCTCATCTGTTTTGGCTCGAAGATCATGGACCATACAAGATGGAGAAAGGGTTCTGCGTTGTCTCAAACGAGCGCTTAAAA
TTGCAAATTCAGCTCAACAAATGACCAGCGCAGCTCGGGGTAGTACAGGATCTGTTACCCTCTTCATCGAGATATTAAACAAGTACCTCTATTT
CTTTGAGAAAGGGATTCCACAAATCACAGTTGAATCAGTGGAGAGCATGATCCAACTGATCAAGAACGAAGAATCGTTGACATCAGACCAATCT
GCCGAATCCTTCTTGGCAAGTACGCTTCGGTTCATGGAGTTCCAGAAGCAGAAAGGCGGTGTCGTTGGTGACAGATACGAGCAGGTCAAAGTAT
AGAATATCATATTGGTAACAAGAGTTTGTTTTGAAACCCCTTTTGGTTGGGTCTCTGAGAAATCATAAGGGACTCTGTGTGTGTTAATTGCTGC
TCTGAAATGTATACCCGGTTTAGGTCTGGTTTATTCCTCGGATTTTTGAAGGTTTGTAACTTGTGGAGTTTGCAGTGTTTATAAGAATCTTACT
TGATCACTGGTGAGTAAACCCAGTTCAGCATGGGATATTGGATGAGGTTCTCATACAATACATAGATGTTTTTTTTTTTTCCTAG |
Primers for UN14398 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAGAAACCTGAAACCCACCC |
60.204 |
20 |
GAAGTCCGCAACTCGCTAAG |
60.154 |
20 |
231 |
8 |
238 |
| 2 |
AAGAAACCTGAAACCCACCC |
60.204 |
20 |
TTCGTCTTCTCCTGATCCGT |
59.803 |
20 |
100 |
8 |
107 |
| 3 |
AAGAAACCTGAAACCCACCC |
60.204 |
20 |
GCTAAGCATCTGAGCCGAGT |
59.746 |
20 |
217 |
8 |
224 |
|
|
