 |
Simple sequence repeat (SSR)
>UN14405
GGGGACAAAAAGTGAGAGGACCATGTATTAAGCGACACTCTTCCGTTAGAGATTTAGATCGGTCCAAAATTGACATTCACATCATCTTCTTGCT
CTCCATTATCATATCCCATTGTGAAATCTCTTCATCAACATTCAATGGCGGCCAAGAAGGCAGGAGTGATCGCTTTGTTCGACGTGGACGGGAC
TCTCACAGCTCCAAGGAAGGAAGCTACTCCAGAACTTCTCGATTTCATCCGAGAATTGCGCAAGGTCGTCACTGTTGGAGTCGTTGGTGGATCT
GATCTAACCAAGATATCTGAGCAGCTTGGCAAAACAGTCACTACCGACTATGATTATTGTTTCTCTGAGAATGGTCTTGTTGCTCATAAAGATG
GAAAACCCATTGGGATCCAGAGCCTGAAGCTGCACCTGGGAGAAGATAAACTCAAGGAGTTGATAAAATTCACGCTGCATTACATTGCAGACTT
GGATATTCCAATCAAAAGGGGAACATTCATAGAGTTCCGAAATGGCATGCTCAATGTATCACCTATTGGTCGCAACTGCAGCCAAGAAGAAAGA
GACGAATTCGAGAGATATGATAAGGTTCAAAACATAAGACCAAAGATGGTGGCTGAACTTCGTGAGCGGTTTGCGCATCTGAACCTTACTTTCT
CCATTGGAGGACAGATTAGCTTCGATGTCTTTCCTAAAGGTTGGGATAAGACTTACTGCTTGCAATACCTTGAAGACTTTACTGAAATCCATTT
CTTCGGTGACAAAACCTATGAGGGAGGAAACGACTATGAAATCTATGAATCACCAAAAACAATAGGCCATTCAGTTACCAGTCCAGATGACACA
ATGGCAAAATGCAAGGCTCTGTTCATGTCTTGAAACACTATCCAGTATCCATCTCAAGAACACAAGTGTCAGAGTTTGGTTATTATTGGTGAAT
TTCTTACAACTTATGATTATTTACATCACAAAGAAACAGAGAGAAAAGTATGTTTGGGATACTGTTTGATTTTCATAAAAAAATAAATGTTTTT
TTATAATCTTTTGTTTCATAACAAGAACTGGTTCTCATAGCTAAAGATCAAAGGATGTTAAGGGTTTGCTTTACAAGAATTTACAAAAAAAATA
GAAATACATATATATTTAATTAGAAAAGCATATTAAACTTCAAACTTGAAAGTGATAAGATAAGTTAAGACTCAACCACAGGCTCAGGCTCTTC
TCCTGCAGCAGCTTCAGGGGCTGCTTCCTCTCCTCCTCCTCCTCCTTCTCCCTCTGGAACCGTGGCGCTATATTCAAGTTTATGATCTTCAGAA
GGCGGAGAAGGGGCACCAGAAGAGGCGGATCGAAGGTGCTTAGCTGCAGCTTCATGAACGTTATTGTAACTTCCTTTCTCGAGAAAGAGCTGGT
TGAAATGGACTTTACAGTAGAGGACCCCGTTAAGAGAAGCGTAGGAAGAGTGAGTCAAAGGACAACCACTGTGTGCGCACTTGAAGCAAGTCTT
GTGGTAACATTCTCCTTCCATGTTTACTTTCTCAAGTGGATAAACAGTTTTGTGACAAGTCGCACATTTGTCTTGAGTTCCACTGAAGAATGAA
GATAGCTTGCTTGGAGCTCGAGTCATATGATCATTCGGCTTCTCTGTCTTTCCTGTCTGAAAATTCTTGCTGAAATTGCCAGATTCTTTGAAAA
GCTGCTCGAAGTGAGTCTTGCAGTAGAGAACTCCATCCATGGACGAGTAAGTACTCATCTGGAGAGTGCCATTGCAATGGCTGCATCTGAAGCA
TGATTTGTGATAAGTGTTTCCCTCTAACGTCAACAAATCCATCACGTAAACGGTTTTGTCACATGCCTTGCATTTATCCAACGTTCCCGTAAAC
GCCGCCATTTTATATATCTTTTCTTATTCCAACGAGGACGTGAATATTACACAAAAAAAAACAAAGACCAGTTTTTGTTTCTTTCTTGTCATCA
ACGAGTTGTTATGACTTATTTAACAAAGTTTCTTGATTGACAACTTTTGGTTCCAATGGTTGAGATCC |
Primers for UN14405 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTCTTCTCCTGCAGCAGCTT |
60.035 |
20 |
CAGCTAAGCACCTTCGATCC |
59.978 |
20 |
146 |
1217 |
1362 |
| 2 |
CACAGGCTCAGGCTCTTCTC |
60.284 |
20 |
CAGCTAAGCACCTTCGATCC |
59.978 |
20 |
158 |
1205 |
1362 |
| 3 |
CTCTTCTCCTGCAGCAGCTT |
60.035 |
20 |
GCTTCTCTTAACGGGGTCCT |
59.713 |
20 |
234 |
1217 |
1450 |
|
|
