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Simple sequence repeat (SSR)
>UN14447
GCCAAAACCATTCTTCTTAAATTTTAGAAATGCCAATTTTCTGTTGGGTCAGTTCCAAAACCCCCAAATTACTAGCCACAGCCCATGATTAAAG
TAAAGAAGACCCAATAAAAAAAAAATTAAAGCCCAATTACTGATGACGCTTATATGTATATAGCTCTCAAAGGTAAAGAGTTTAGTTGGTTGTT
GTCAGAACTATGTTATCAGCATCTCCAACTAGATTCGTTGCTCAAAGAATCTCATTCCGACCATCTAATACGATTCCGACAATCTTCCTTCCTC
CCTTTCCCAGAGGTTTCCCGCAGAGATCGTTGACCAAAGCTTCACTAAACGCTCGAATCGTAGCAGCTATGTCGTCGACCACCACCACCACCAC
CGCCGTCAACGCCGTCACAGACGCCGGCAGAGGTAACATCACTCACGTCATATTCGACATGGACGGGCTCCTTCTAGACACTGAGAAGTTTTAC
ACGGAGGTACAGGAGAAGATACTTGCTAGATACAATAAAACGTTTGACTGGTCTTTGAAAGCCAAGATGATGGGTAGGAAAGCCATAGAAGCTG
CCACGCTTTTCGTCGAAGAATGTGGAATCAGTGACTCTCTTTCTCCTGAAGCTTTCATTGTAGAGAGAGAGTCAATGTTGCAAGACCTCTTCCC
CACAAGTGACCTTATGCCAGGAGCTAGCAGACTTCTCAGACATCTCCATGGGAAAGGAATCCCAATTTGTGTGGCCACAGGTACACACACACGA
CATTTTGATCTGAAAACGCAAAGACACCGGGAGCTTTTCTCATTGATGCATCACATAGTGCGGGGAGATGATCCTGAGGTGAAGCAAGGGAAGC
CTGCTCCTGACGGTTTTCTTGCTGCTGCCAGGAGATTTGAGGACGGTCCTGTAGATCCACGCAAAGCTCTGGTGTTTGAAGATGCTCCTTCCGG
TGTCATGGCAGCTAAAAACGCTGGAATGAATGTAATAATGGTACCGGATCCGAGATTGGACAAGTCCTACTGTGGTGTTGCAGATCAGGTTCTA
GCCTTTTTTTTAGATTTCATACCAGAGGAATGGGGCCTACCTCCGTTCGAGGATTCACAAAACTAAGATCACAAAGCTTCAGTTTAACATTATC
CTCAAGCTATAAGATTCTTTTATGATTGAAGAAGACCTGTACTCTGGCTGTATGGGAAATAATGTTTGTGTTCATCATACACTTGACTGACAAT
AAAATGATTTGATTTTTATTGGGGTCTTTTTGTTATATGTTATGATTTGATAATAAATTTTTAATACTTTATTGGTAATGAGTGACTCTGACAT
TACCAAAACCCTTGTATTGATGCTAGCTTAAGTTAGTACAATGGTATGTAACTTATTGATAGAAAAAAAA |
Primers for UN14447 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTCCCTTTCCCAGAGGTTTC |
60.045 |
20 |
CAGTGTCTAGAAGGAGCCCG |
60.005 |
20 |
180 |
280 |
459 |
| 2 |
CTCCCTTTCCCAGAGGTTTC |
60.045 |
20 |
TGGCTTTCCTACCCATCATC |
59.894 |
20 |
276 |
280 |
555 |
| 3 |
CTCCCTTTCCCAGAGGTTTC |
60.045 |
20 |
TTCCTACCCATCATCTTGGC |
59.894 |
20 |
271 |
280 |
550 |
|
|
