 |
Simple sequence repeat (SSR)
>UN14509
AAAGAAAAAGAATATCCAAAATGACCAAACACTCACCACTCTCACTTTCAACATCAATCTTTCTCATCGTTGCTCTTTTTACTGCAACAGCCGC
ACTCGACCCTGCTCCCGAAGACCCGATTTTCGAACTGTACATGCATGATATACTTGGAGGAAGCATTCCCACGGCAAGACCTATTACCGGTTTG
CTTGGAAACATCTACAACGGTCAAGTACCTTTTGCTAAGCAGATCGGTTTTGTTCCTCCAGAAAACGGTGTAGCCATACCAAATGCGAACGGCG
CAATGCCAACGGTCAACGGTATCAACGGTATTCCTCTAGGTACCGGTTTATCCGGTACAGCGTTTTCAGGTCAGAATCTAAATGGGATTCAGAC
ACAGCTGGGACCTGATGGTCTGAGTCTTGGCTTTGGGACGATCACGGTGATCGATGACATAATCACATCAGGTCCCGACTTGGGTTCTCAGCCG
CTTGGTAAAGCTCAGGGGGTGTATGTTGCAAGCTCAGCAGATGGAAGCACACAGATGATGGCTTTCACAGCTATGCTTGAAGGTGGAGAGTACA
ATGATAATCTCAATTTCTATGGAATTTACAGAATCTGAAGCGCCATGTCGCATCTGTCTGTGACTGGAGGAACAGGAAGGTTCAAGAACACTTG
TGGGTTTGCAGAGGTAAGGCCGTTGATTCCTGCAGGTCAGCACTTTGTTGATGGTGCAGAGATGCTGTTGAGGATCATTGTCCATCTTAAGTAC
TGAGAACTTGTATATGAAATGAGTTGAAAAATGTTTTCTAGTAATTAAACAATGCAAAAGAAACATTGTATTTTATATGATTTGATACAACAAA
CATCATATCCTGAACCATTTATTTCATGAACAAACATTGCTTGGCCAGCCGCTACTTCTTCTCCTATAGGGGCCATGAGTTTACTCAGAACACT
CCGAAGAATGTAGCTGCAGCAAAGACTAAGAAGAGAGCTCCACCAACGTATCCCACCACTTTCTCGGAAATATAGTTGGCTAAAAACGCGCCGC
CCATGATTGCAAGCAATGTTGCCACTAAGTGTCCAGCAATAGCACCACTCGCAACTCCCCATGGTGACTGTGCAGCACCAAGCGCAACAGTTGC
AAGCATTGACCGATCTCCCCATTCAGCAAAGAAGACAAGGCTGAATGACTTCCAGAGGATTTCAAGTGGGTTTGTCAACTTTTTAGAAGCCTTT
TCTTTAACGAGTTCCTCAGCTTCAGTGTATTCACCGAGTTCTATACCACTCTCCTCACCATTCTTGGCTTCAGCTTGTGGAAGATCCCATGCAT
CCTTAATGGATTTCAATCCAAAGAACATGAGAAGCGCAATTGCAGCATATTCTCCTATCGGTACCGTTGTCTGGAACTGAGCAGGCACGGATTG
AAAAACCTTCCCGATAACAACCGATAAGACAGTCATCAACGATAAAGCTCCCATTGAACCTAAAAGGACCAATGTTTTCTCGTATTGCATAGCC
AATAAAGCAGCAATAAAAAATGTCTTGTCACCAATCTCAGAAACGAAGATCAGTGAGAAGGCTGCGGTGAAGCCTGATTTTGCTACTGCTGCTA
GAACTGAGGATGGTCCTCCCTTGACAAAAGTGATTAGAGAGAATACCAAACCGCAACTCAGTAGTACAAGTGCTATCGATAATGAGTAAGGGAA
TGGCCCTTGAGGTTTTAAGCTTTCTTGTGAAGACTGATCAAGAGAACTACTTTGAGATCCATCCTCCTCACTCCCAGATCCAACACCAGCATTT
GATGCATGAACTCTAAATCTTCCACAAAGCAAATCCGGTCTTGATCTCCATCTACATCTTAAAGGAGGAGACGCTGGTTTTCTAGAACTCTTTG
GGCAAGGCAACGATTCAGACACGGATAGAAACGGGAGTTTCCGTACTGAATATACAGATGCTGATGCTGTGGAGTTAGCACTATTGCTAAAGCT
TGTAACACTCATTGTTCTTTAACTATGGATCCACGGAAGCAGAGGGTTTAGTGAATCATTGCTTTTGTTTGATAAACAAGAAACCCAGAAAGAA
AGAAAGAAAGAAAGATGGAGACTTTCTTCGGATTCTACTCTGCAGAGAGAATTGGGTTAGTGATGATGGAGATCC |
Primers for UN14509 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACAGATGCTGATGCTGTGGA |
60.436 |
20 |
GGATCTCCATCATCACTAACCC |
59.657 |
22 |
210 |
1934 |
2143 |
| 2 |
GACACGGATAGAAACGGGAG |
59.55 |
20 |
GGATCTCCATCATCACTAACCC |
59.657 |
22 |
246 |
1898 |
2143 |
| 3 |
AGACACGGATAGAAACGGGA |
59.55 |
20 |
GGATCTCCATCATCACTAACCC |
59.657 |
22 |
247 |
1897 |
2143 |
|
|
