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Simple sequence repeat (SSR)
>UN01486
GGGCACACTTTTAACTTTCTCCTTTTCGTCGTCAGAGACATCTCTCAATCCCCAAATCGTCGAAGATAGATTCAGATCGGAAACGGAAGAAAGA
CTCTGTCTCTTCGACAGATCAATCAAAGGACAAGAGAGCCGATCACCACCACCACCACCATCACCAAAGCAAGCACCGTAAGAAGAGCAAGATG
GCGTCGAGAGACCAAGTCAAGGCCTCGCACATTCTGATCAAGCATCAAGGATCTCGCAGGAAGGCGTCGTGGAAGGATCCGGAAGGTAAGATCA
TCATGACTACCACCAGAGAATCAGCCGTCGAACAGCTTAAATCGATCCGTGAAGACATCCTCTCTGGCAAAGCCAACTTCGAGGATGTGGCCAC
TCGTGTTTCCGACTGTAGCTCTGCTAAACGCGGCGGCGATCTAGGTCCATTTGGGCGAGGTCAAATGCAGAAACCGTTTGAGGAAGCAACATAC
GCACTGAAGGTGGGTGATATAAGCGAGATTGTGGACACAGACAGTGGAGTCCATATCATAAAGAGAACAGCTTGATCTGTTTATCTCCTTCAAA
GCCTCCTCCTATCATGTACCAAAAGTTACCAGCTTTTTTTATTTACCTTCTCTTCTTTGACCAAAGATAGAAGATTGAATAATAAGATAAAAAG
CTTTGCTATCGTGGCTTTGGTTCTGCATCTTTATATGGATTTGATACAACCAAACATATGATAAAGACAAGAAACTGTATCTTAGTTACTTCTC
ATAATTTCATAATAACGAATTTCTGTTGTGACGAG |
Primers for UN01486 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GATTCAGATCGGAAACGGAA |
60.014 |
20 |
GCTCTTCTTACGGTGCTTGC |
60.162 |
20 |
114 |
69 |
182 |
2 |
GATTCAGATCGGAAACGGAA |
60.014 |
20 |
ATGCTTGATCAGAATGTGCG |
59.83 |
20 |
165 |
69 |
233 |
3 |
GATTCAGATCGGAAACGGAA |
60.014 |
20 |
CTTACGGTGCTTGCTTTGGT |
60.305 |
20 |
108 |
69 |
176 |
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