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Simple sequence repeat (SSR)
>UN14631
CCTTGATAACCAAATGGTTCAATGCAAGTTCCGAACTTTTTGTCCTATCTACTACACTGATCACTCTTTGTCTTAGATCCTTTTAAAGAACTCA
GCTTGAGATTTTAATCCACAGCTTATACAAAACAACATTACAAAAAAAAAGAGTTGAATAATAGAAGAGAGCAAAGAGTGATGATCATCAAACA
TTCTTGAGCTTCTTCATCTTGGAAGGTGGCCAACGACCCTTCTTCCTCAACTTACGCTTACGAACCAGACGTTTCCTCCGTAGCCTAATCTTCT
TGGCCAGCTTCATCTTCATCCTCTGTTCAAGCAGAAGCTTCTCTTTACCTTCTTTTGATTCCAATGGTAGTTTATCCACTGAGACAGCAGCAGC
AGCAGCAACAGTCTTAGGTGGTTCCTCATTGCTCTCGGGCTCAGCTCCGTCCACGCCAGAAGCAGCTGCCTTCACAATTGGTGATCTTCCATGG
CTATTGCTCAAACTGTAAGCACTGAGAAAGACTCTGTTCTTGTTGGGTTTAAGGCTGAAAACTGGTGAAACGTAAGAGGAAAGTTGAAGCCTTG
GAGGAGATGAAGAAGAGAGAGGAGCGAGAGAATTGAAACAGAGAAGACCCATCTTCTTCGAATTTTGAAGGATTTCTTTCGCCTTCAGAGCTTC
TTCATGTGAAAGTTTGGTTTCTGGATAAGCTCCTTCCCC |
Primers for UN14631 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTCTTGGCCAGCTTCATCTT |
59.955 |
20 |
GAGAGCAATGAGGAACCACC |
59.661 |
20 |
134 |
279 |
412 |
| 2 |
AATCTTCTTGGCCAGCTTCA |
59.955 |
20 |
GAGAGCAATGAGGAACCACC |
59.661 |
20 |
138 |
275 |
412 |
| 3 |
ACGCTTACGAACCAGACGTT |
59.803 |
20 |
GAGAGCAATGAGGAACCACC |
59.661 |
20 |
171 |
242 |
412 |
|
|
