 |
Simple sequence repeat (SSR)
>UN14644
GCTCTTGCAGTGGTTCTATCATGGGCCTCCATACTAACTCTCGGAGCAATGAAATTCTTACACTGGTCAAATCTCTGTTCCTCATTGAAAGGCA
TAACAAGTTAAAGCTAGCACTCACGGGTCTCTCTACTTGTTTTGTTTTTTTTCAAAACAAAACAAACACTCCGACACAAATCAAAACCCGACAA
ATCCACATTTCATGTGCTCTGCCCCTAACAAAAAGGTCCACAACCAAACCAACCAATCTTGTCTTTTACCACCTCTATAGCTGTATACCTTTTT
TACTTCGCTTTCCCATATCCTTTTTAACCTCTTAAGGTCTCTCGGAAACAGAGAGAAAGAGACACTTTCACAGAAAGAAAATCATGGGCGTCTC
TCTGTTCGTCGCCTTCACCCTTCTCTCACTCTGTTTGCACACTTCAACATCCGAGCTTCTACGGTTTCAGCTCTCCACCATATCAGCTGCACCT
TCGCTTTTGCCCGAAGCGCCTTCTAGTTTCTCAGCTTCACCTCCTCTGGAGGCTATGTCTCCGGATATATCTCCTCTGTTCCCTACTCCAGGTT
CGAGCGAAATGTCTCCTTCTCCGTCAGAATCTTCTGAGATGCCGACAATCCCATCAAGCCTTAGTCCACCAAACCCAGATGCTGTGGCTCGTGA
TCCCCTGCTAGACACTTCTCCGGTGGGGTCTCCTCTGCCTGCATCTTCCTCTGTTTCTTTGGTCTGGTCACAACCCTCTCTGCTTCTTGTGTTC
CCCATACTGCTGCAGCTACTACCTTTCTGAATATTCTCTAGTTAATCACTAAAAACAGAGGTTGACAATGTATTTTCCTTGTAGTTTGATATTA
TATACCTTTTTCTATTAATTGTTGGTATGAATGAAAATTGCTCATGAAGTACTCTCCTGCCATTTGGCTGGCTAGTGCAGTTGTTACTACTTGT
AACTTGTGTTATGGGTTTTGTGCCTCAAATTGATTGATCCAAATTATAAGTAATACTGTAAGAGTGTATCTCACATGTGGCTATCTGAAACTGT
GGCTTGCTTTGTTGTGATTGAACAAATAAGAGATGCATTAAGTGGGGTAGAGGATAATTACGCTAATCCAGGTTACAAATACAGCACGAAACAA
AAGATGTTTCAATCTTACAAAAAAAAAAAAAAAGAGTGGGTGAATCAAACACATAAAGAAAGAAAGTATTGTAGCCAATGCTCATGAGGTATAA
TGAGGCATAGAAAGAGTTTCCTTGTTACCATGATGATGGCGCATTTCAAATGTAGAACAGCTTCCCGAGGAACTTGTAGTCGAGATGGAAAAGA
GTGCGAGACGCACCGGGAAGAAGAAGAAGAAGAAGACGTCTCTTGAGACTCGAGTTCTCGTCCTTGAGGGTCTCAACAGCAAGAGAAAGCTGCC
TGATGACCTCTCTCTTCTCCTCGTCTTTCTCTAACAGCTGTCTTCTCAGAGCCTCACTCTCTTGGATCAGCTTCAACCTTTCTTGTTCCAGTTT
GGAAGTGGAGGAGGCGTTTCCCTGGTCCTGGTCGTCTTCGTCTTCTTCGTCAGGGTCTTCAATCTCGGAATGGGGATCATCGGAAAGAGAGTGG
TCGATAGAGAAAGAGGAAGAGGATGATTTAAGGTGATGGAAACGGTGGGCTAAGGAACGGTGAGCACGATAGAAATCATGGACGAAGGAGATAA
GCTCAGGACGTTTCTTGTAGTAAGTCTCCGCACGCTGCCCAAAAGAATCTGCGTTACCCTCCTCGATTAGCGACAACATGGCATTTGTCTTTGA
ATCAAGCTCTGCAAGTGTGGAATGAAGCCATTGCGATTGCTTAGAGGTCGTCGTCGTCGTCTTGTGATGACTCTCGAACCACCACCATCTCCTT
TTCTCTTCTTCCCCTCCAACCATATTTCTTTCTTCTTCGATCCAAGACTCTTCTTGTCTATCGTACAGCCTCTCCCCGTTCTTATTACAGTAGT
AGAGTAATGCGAATAACAGTAAATCTGTTTTCAAATTTTGAATTGTCTCTGTGTCCACCC |
Primers for UN14644 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCCCGAGGAACTTGTAGTCG |
60.246 |
20 |
CGAAGAAGACGAAGACGACC |
59.989 |
20 |
269 |
1285 |
1553 |
| 2 |
TCCCGAGGAACTTGTAGTCG |
60.246 |
20 |
CCCTGACGAAGAAGACGAAG |
59.982 |
20 |
275 |
1285 |
1559 |
| 3 |
TCCCGAGGAACTTGTAGTCG |
60.246 |
20 |
GGTCATCAGGCAGCTTTCTC |
59.957 |
20 |
134 |
1285 |
1418 |
|
|
