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Simple sequence repeat (SSR)
>UN14679
GGGCCGCCCGCATCTCTCTCTGTTTATTTATTCTTATCTCCTTTGCACTCTTCAAAGAGAGAACCAGCTAATAATCAAATCTCAAGATGAATAG
GGAGAAGTTGATGAAGATGGCCAACACTGTCCGCACTGGCGGAAAGGGTACAGTCAGAAGAAAGAAGAAGGCTGTGCACAAGACCAATACAACT
GATGACAAGAAGCTTCAAAGCACCTTGAAGAGAATTGGAGTTAACTCCATTCCAGGAATTGAAGAAGTTAACATCTTTAAAGATGATGTTGTTA
TTCAGTTCACCAATCCTAAGGTTCAAGCTTCAATTGCTGCAAACACATGGGTTGTTAGCGGTTCTCCTCAGACCAAAAAATTGGAAGATATCCT
TCCTCAAATCCTCAGTCAGCTCGGGCCAGACAACATGGACAATCTGAGGAAGCTAGCAGAGCAGTTGAAGAAGCAACCTCCTGGTGAAGGTAAT
GCCTCAGCAACCATCCAAGAGGAGGATGACGATGATGTCCCAGACCTTGTAGCTGGTGAGACGTTCGAAGCTGCTGCTGCTGAAGAGAAAGTAC
CTGCTGCTGCTGCTGCTGCTCCTGCTGCTCCTGCTGCTGCTCCTGCTGCTCCTGCTGCTTCTTCCTAGACAAGAAAAAAAAGCACTTGGATTTC
TGCGTATCTTTATATATGTTTGTTCTCTCCATCCTTTTCTTTTGTAGTGTTTCCGACCAGATTCTACTTTCCCAGATAATGATTTTAAGTTTTT
CTTTTTTATCTAATTGATTATTTCATCTGGTTCTCGTGTCTCCATTTCTACATGG |
Primers for UN14679 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGTAATGCCTCAGCAACCAT |
59.962 |
20 |
TAGGAAGAAGCAGCAGGAGC |
59.859 |
20 |
167 |
465 |
631 |
2 |
TGTAGCTGGTGAGACGTTCG |
60.049 |
20 |
TAGGAAGAAGCAGCAGGAGC |
59.859 |
20 |
114 |
518 |
631 |
3 |
GACGATGATGTCCCAGACCT |
59.928 |
20 |
TAGGAAGAAGCAGCAGGAGC |
59.859 |
20 |
134 |
498 |
631 |
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