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Simple sequence repeat (SSR)
>UN14864
GAGCAATACTTATTCATAAAGCAAACAGATACAAGACACTATTTGTAGCTACAAACCGATATCACCCCGGAAGTAGGGATTTTATAGAGCAAGT
ACATCATACAACACCACATTACACTGAGATTCAAAAGAAATAAAAAAAGAATGCGTCTTCAAAGAGAGCATAATAATCTTTATGGATTTTAAGA
AGTCAGTATTGTGATGTAGGAAGTCGCAGAAAGGATAGCAAGAAGAGGGAATGAGAACTTGATAGTACTCCCATGAGATGATGATGATGATGAT
CTATGTCCTGGAACTGTTTTTGATCCATTTCCATGTTCTGAAGTGTTTGATGATCCGTTGCAGCTACTAACTGGAGGAGTTTGAACATTACAAG
CTTTAGGCAAAGCAAAAGCCTGTGTTTGATTAAAATTGATCCCAAGATGAGGGGCTCCACCTTTGAGAAGTTCACACAAACACTCACCAGAAGA
CCTTACAACATGAGCCAACTGACTGCAGCATTGTTGAGAAGGAGAAGAAGAGTTTCCAGTAATGTAGCCGAGACATGGAGCCATACTCATTAGA
ACATCTGTGCAGCTCGATTGAGCAGAAACATTGGACATCACCGCAACTGAAACTGTTAGCCACAGTAAACACATTCCAGGTTTCATGTTTTTTG
TCCCAACAAATCTCTCAAGAGTTTGTTTGAGTTTTTAATGGTTTGTGTTGGCC |
Primers for UN14864 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCCCGGAAGTAGGGATTTTA |
60.136 |
20 |
TGCAACGGATCATCAAACAC |
60.526 |
20 |
280 |
65 |
344 |
| 2 |
TGTAGGAAGTCGCAGAAAGGA |
60.001 |
21 |
ACAGGCTTTTGCTTTGCCTA |
60.018 |
20 |
197 |
203 |
399 |
| 3 |
ATATCACCCCGGAAGTAGGG |
60.032 |
20 |
TGGATCAAAAACAGTTCCAGG |
59.956 |
21 |
251 |
59 |
309 |
|
|
