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Simple sequence repeat (SSR)
>UN14911
ATGGTAACTTAAAATTATTAAAAACTAAAACATGTCAAAGATACATTTTCAAAGTTATACAAAACATTATTAGTGCCATAAATCGCAGTTCTGT
TATTTCCCCAGTAATGTAACAAAACCAGTAAAGAAACAAAAACAAGATTTGGCACATGCCAGTAGAAGTATCTCTCTAGAAAACAAAGGGAATG
AGCGCCTTGGTATGCTTGGGGAAGTCATCAAACTTAGAAAGATACCATCTTCTTGTAGCATAGCTCCGACCCATAAGATAGAAAGTAGTTCCCA
TAGCCCAAGAAAGGGAGTAAATAGTCTGAGAAATCATAAAGAATCCCCAAAACACAAGGACCTCGAACATGTAATGAGGGCATATAACTGTATC
GAACAAACCACCTTTTGGTATCTTGTACTCTTTCTTCCCACCACCTTCACCTTCTGTCCTCAGCTTAGCTAGCAGAACATGGTGATAGAGATTC
CCAACAATCCCCACCATAAACATGACAACTCCGGAGAATTTCAGATCCAAACCTGGCTGGGGTAGTCCCAGAGTGAAGCTTTGGCTGTATAACA
CCAACGCCGTGGATGAGAAATAGCCGCTTGATATGGTGAAAGCTACGTCTAGGGACATCCCTCCACTGTACTTATGAATGAACATAACCTCCAA
GACCCTTTTGAAGAAATGGAGGGACAGTGCGGATTTGAGAAGAAGGAGCCTGAGATCTACAGAAGGTGAGAGAAAGAAAGAAGCTGAAGCGGCT
AGAAACGCTGGTGTATATAGACAAAGCATCCCGGTTCTGCTCGAGATGCTGCTGCCCAATCGCTGTTTTTGTGATGATGATGATGATGATCCGT
TGTTGTTGTTGTTGAATTTTGAGTATTTCAGATTATTTCCTCTCATTTCCGACCAAACCATAAACGGCAGAGCGGCTAAACTAACGACGGTCAT
AGTAGTGAGCAATATCGACGGAGGCGGTGGATACAGAAAGCTAATCACCATTTCCATTCTTGTTTTGCTTTTGGAATAAGAAGAAAAGCAGCTT
CTGCCC |
Primers for UN14911 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TAGACAAAGCATCCCGGTTC |
60.074 |
20 |
CGTCGTTAGTTTAGCCGCTC |
60.039 |
20 |
166 |
770 |
935 |
2 |
GTGCGGATTTGAGAAGAAGG |
59.813 |
20 |
CGTCGTTAGTTTAGCCGCTC |
60.039 |
20 |
251 |
685 |
935 |
3 |
TAGACAAAGCATCCCGGTTC |
60.074 |
20 |
CGTTAGTTTAGCCGCTCTGC |
60.173 |
20 |
163 |
770 |
932 |
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