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Simple sequence repeat (SSR)
>UN14945
TCCTTCTCCTCACAACTTCTTCGCATCAGAGATTCTAATCATGGCGACGACGCTATTCAATGCCTCCTGCAGCTTCCCGTCGATCAAAGTAATC
GATTGCAAGAGCTACGTTGGTCTCAGATCGAACGTGAATCAAGTTCGAATTGCTTCTCTGTCAGTTGCAACTTCTCAGCGGCGCTCTCTTGTCG
TGAGAGCCAGCAACGGACACGCCAAGAAGCTTGGAAGGAGCGACGCTGAGTGTGAAGCAGACGTTGCTGCAGGCAACGTTCCTGAAGCTCCTCC
GGTTCCACCTAAACCGGTTGCTCCGGCTGGTACGCCGGTTATTCAGCCTCTCAATCTAAACAGAAGGCCACGGCGAAACCGTGCTTCTCCTACA
GTGAGAGCTGCTTTCCAGGAAACTGACATCTCCCCTGCTAATTTTGTATACCCACTTTTCATTCATGAAGGTGAGGAGGACACGCCTATTGGAG
CTATGCCCGGTTGCTACAGGCTTGGCTGGAGGCATGGCCTTTTACAAGAGGTTGCAAAGGCTAGAGCTGTTGGTGTCAACAGTATCGTGTTGTT
TCCCAAAGTCCCCGAGGCTTTGAAGAATCCGACAGGAGACGAGGCATACAACGACAATGGTCTTGTGCCTAGAACAATCCGTCTTCTCAAAGAC
AAGTATCCTGATCTTATTATCTACACTGATGTTGCTCTGGATCCCTACTCATCTGATGGTCACGATGGTATAGTCAGAGAAGATGGTGTAATAA
TGAACGATGAAACTGTTCATCAGCTATGTAAGCAAGCTGTTTCTCAGGCCCGAGCTGGAGCGGATGTTGTTAGTCCGAGTGACATGATGGATGG
TCGAGTAGGCGCGATCCGTGCAGCTCTCGATGCTGAAGGCTTTCAGAACGTCTCCATCATGTCTTACACCGCAAAGTATGCAAGTTCGTTCTAC
GGGCCCTTCCGTGAAGCTTTGGACTCAAACCCACGTTTTGGGGACAAGAAAACTTATCAGATGAACCCAGCAAATTATAGAGAGGCTTTGATTG
AGGCTCGTGAAGATGAGGCTGAAGGAGCCGACATTCTCCTAGTGAAGCCAGGTCTCCCATATTTGGACATCATTCGTCTTCTCAGGGACAAATC
TCCCTTGCCCATTGCTGCTTACCAAGTGTCTGGGGAGTACTCGATGATCAAAGCAGGGGGAGTCCTGAAGATGATCGATGAGGAGAAAGTGATG
ATGGAGTCGCTCATGTGCTTACGCAGAGCTGGTGCTGACATCATCCTTACCTACTTTGCTCTTCAAGCTGCTACTTACCTATGCAACCAGAGGC
GGTAGTAGAAGAGACAGAGAGAGAGAGAGTTTACTGGTTTGCATTTAAGTATTTAACCATTTGAGTAATCATGATTTTTTTTGCCTTGTACTAC
TTTTCACTTGCAAATCTCATGTTCTGGTCCAACTTTGTTTGGTCATGTTTCTTTGTCTCGTGCGTTTATGTACTATTATGTCTCTGTCTAATTT
TGTATCAGAAATGTGTTCCTCAT |
Primers for UN14945 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCAACCAGAGGCGGTAGTAG |
59.898 |
20 |
ACGCACGAGACAAAGAAACA |
59.49 |
20 |
171 |
1305 |
1475 |
2 |
GAGTCGCTCATGTGCTTACG |
59.621 |
20 |
ACGCACGAGACAAAGAAACA |
59.49 |
20 |
250 |
1226 |
1475 |
3 |
TGGAGTCGCTCATGTGCTTA |
60.562 |
20 |
ACGCACGAGACAAAGAAACA |
59.49 |
20 |
252 |
1224 |
1475 |
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