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Simple sequence repeat (SSR)
>UN14952
GGGTGTGAAAGCTTTGCAAAAAGAAAAAAAAAAATCAAAAACAGAATTTTCATTTAAAAGGTTTTTCTCGTTCTTCAGCGAGAGAGATTAAAAG
CTTTCATTCTTTCTCTATATAGAAGAATCTCACGGCATCAATGGCGTCGATGATTCATATCGTCATCTCCCTATTCTCTACTTGACTTTTCTAT
CGATCTGGTCTCTCTCCGCTTGTTCTTGGACCGTTAACACTTTCAAGAACCGCAATTTTCAGACAAATAGTTTACAATGGATTCTTGCTTCAGT
TCCTCTGATCAAAGCATTACAGCTAACTCTATCTTTCCTCTTTTGGCATTCATGTTTTCATCACCAAATATGCTCTCTTTGGATGTCTTTTGGT
GTATATGTGACTGGTGTTCTGTTTCAGACAGCTTCCTTTGTGTCTTTTTTACTCATCTCTCACGGTTATTGCATCACATGTGAACGGCTCTCGT
TGACAGAACGTAGAACCACAGCTTCACTTGGTTGTGTCTTTTACTTGACTCTCGCTGGATACAGAGCTTCTGTTCCTTACTTCGCAGTGCTTCT
GATACTTAACTACATGATCTCATTCTATGTGATTTTCCACCATATATCTCAAAACTTTATCGGTGTTACGAGAACAGCTGAGTTTCATTGAGGA
TGAGAATGTTCAAGCTATGCATGATGCTGTCTATGCTAAATACATCATGTTCAAAAAGTTCCAAGGAGCTATGCAGATAGTAGCAATGGCAGAA
ACTGTGATCTATATGAACATGGATAACTCCTCACAGAACTATTGGCTCAGGCTACTGATTCGAGAGTGGGCTCAGTTTTGCATTTTTCTCTATA
TTGGCTGGACTTTCAGGTCTCAGGACATGGCACCACGGTTCTCGGTCATGCCTACGCTAAAACCCAAAGATCATACAATCATTCCTCCAATTTA
CAGCATGGAAATGGATGCAAAAACATTTAAAGAATTCAGAAGTCATGAATGAAACATTGGAGTGCCAATGCCGCATTCAAACTATGAAAGGCAC
AAAGATTCAGTTCTAGTGATAATACAGCATCCACGATAGCATTCAGACACAAAGCCACATATACAGTGTTGCCTCTCTCTTTTATCTTCCTAGA
AAGGGCAAAAATTCACACACACGGACAAAGAAACAAAGTTTCTTCTTCCTCAGCAACTAGCAACTGCATTGTTCTATCCTCACAGCCTTCTCTG
CCTACATCAACTACATCTCTCTCTCTCTCTTTTATATCTTATGTTTTGAGTTTTGTTTCTTGGTTTTCTCTCTTTTGGGTATATTATATAGAGA
AATAAAGGTATACTTTCTTGTATAGATGCAAAAGTTAACTAGTAGAGTTATAACATTTCTAATGAGAATGTTAACATAGTTCCCTACATTATTT
TGTTTCAAAATCCCAATTCAAACAAAC |
Primers for UN14952 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCAAAAATTCACACACACGG |
60.011 |
20 |
CCCAAAAGAGAGAAAACCAAGA |
59.736 |
22 |
169 |
1133 |
1301 |
| 2 |
GGCAAAAATTCACACACACG |
60.011 |
20 |
CCCAAAAGAGAGAAAACCAAGA |
59.736 |
22 |
170 |
1132 |
1301 |
| 3 |
AGCATTCAGACACAAAGCCA |
59.445 |
20 |
CCCAAAAGAGAGAAAACCAAGA |
59.736 |
22 |
230 |
1072 |
1301 |
|
|
