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Simple sequence repeat (SSR)
>UN14962
GCTTGCTAAAAAGATTAGGAGAAGTGACGTTCCAGATGTAACAGTGTTCCGTGGCTATGGGGATATATCACACATAAAGGTTAACTCGGGTGTG
AACCAGCATCTCTATGGGGATAGATCACATATAAAGGTTGTGAATCAGCAGATAAGACCTCCTTTTTCGGTACTACCCCACAGTGAGTAGAAGA
ATCAAACAGGAAGTGCCAAAGAGAGTGAAGGTGAAGATAAAGGGGAGGATGATCCAAAGGTGACATGTTTGATGCAACAAGCTGAGCTTCTCAG
TTCATTGGCCCAGAAAGTTAATGCAGATAACACAGAACAAAGCATGGAGAATGCCTGGAAGGTCCTGCAGGATTTCTTTAATAAAATCAAAGAG
AATGATTTATTCAAATACGGACTACCTGATATAGATTTCCAACTTGAGGAATTTAAGGATCTTGTTGAAGACTTGAGGATTAGCAACGAAGATA
GTCAAGCCTCTTGGAGGCAACCTGATCTCCCTGATTCACCTGCAAGCTCTGACTATAGCTCAGGATCAACTACAATGCCACATTCTTCTGGTGA
TCAAACCCAACAACCCATGTCTGGTTCTCAGACAGAAACGCAGGAGCCAAATCCTGGGGAGTTACCACCAGCCTCTGTTGCAACTGTGGAACAA
GTGGATTTACTTTCATCTTGTAATGATGTCCTAGAAAACCCTAATGAGATTATGCCTATGTCGGTTGAGGAAGAGTTCAAATCTCCTGTTCAAG
TCACTCCATTGTTCAGATCTCTAGCAGCAGGCATCCCAAGCCCACAATTCTCTGAAAGTGAGAGGAACTTTGTGCTGAAAACACTAGGTGTTGA
GTCCCCATGTCCAAGTGCTAATCTTTCACAACCACCTCCTTGCAAAAGAGTCCTTCTTGATAGCTTGTAAACCAAACCAAACCCAAAAAAAAAC
CTGCAGTTGTGTCTCCATGGGAGCCGACATAACTTGCATTTCTTCCCTCTCTTTTTTGCTTAGATTTTTCTTCATTAGGTTTTGCAGCCATATC
GGCCTGAAAAGTTTTTGTGAAGCGGGCGTGCCATGATCTGCATTTTTTTGTTTTCTCCTCAGTGTTGATAATCTAGAATCCAAGAATGTTAAAG
GGTAACATTTCTAAGTCTAGACCTGAGTTTCTCTTTCAGATACTCAGGATGCCAGGAGTGTTTCTTTTTCATCATCATCATACTCTTAAAACCC
ATTTCATCAAAGGGTTTACAAGTATGTCTTTTTCTTCTCAATTCATGACTTGTGTGTGTGTGTAAGAAACATTCTTTTGTTTGTCCTCCCTCTT
TTAGGGTCAAACCCGGATACGTAATCCGGGTCTTTGCCTTCCCAATGAATTCTTGATTTGTTGTGTTGTTGATTTTATGTACAGAAACCTATAT
TTTACATAAAAACAGAGTTTTTGTT |
Primers for UN14962 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTCAGGATGCCAGGAGTGTT |
60.261 |
20 |
TTCATTGGGAAGGCAAAGAC |
60.051 |
20 |
195 |
1171 |
1365 |
2 |
ACTCAGGATGCCAGGAGTGT |
59.713 |
20 |
TTCATTGGGAAGGCAAAGAC |
60.051 |
20 |
196 |
1170 |
1365 |
3 |
CTCAGGATGCCAGGAGTGTT |
60.261 |
20 |
GAATTCATTGGGAAGGCAAA |
59.878 |
20 |
198 |
1171 |
1368 |
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