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Simple sequence repeat (SSR)
>UN15044
GGATTTCTTACAGATTATATATAGTGATAAACAAAACGCATGGGGTTCTTTTTGATATTGTGTATCTAATTCAACAAGATATAGCTCAAGAGCA
CATAAAACACTTTCATTAACTTGCTTTTCGTAAGAAGAGGAGACGACGATGGGTTTATTGCCACTGGTGAAGAAACTAGGTTTCGTCTTTCTTC
TTGTTTCAGCTTCAGCGTTTGCTCTCTCTTCTGCAGGCAGACCATCCATTTTAATTTATAGTCAAGACAATAATCATCAAGAGTTGGTGGAAAG
AAGGATACATGAACATGAGAGGATTCTGAGGATGAATTCGAGAGACTATGGCCACTTCAGCCCTAGACATAAGCTCGACAGGCCTCCTTCCAAG
CTTATTCCCAACTGATCGCATGGACTCATATTGGGGTTCGACTATATATAGATTCCGACTTTATGAGATGTATGATATATATATATACCATGGC
ATTGCAATAAGTTTAATGATGATCCAGTTATCATCGTAGTTTCAAGATATGTTATATAGTAAACGATTATTATAAAGTCTTCGCTTATAGAAGT
GAGTTTTGTGGAAGTGCATGTCACCTTCATCAGTACAATATATGGATTTGTTATCATGC |
Primers for UN15044 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTATGGCCACTTCAGCCCTA |
60.227 |
20 |
AGGTGACATGCACTTCCACA |
60.162 |
20 |
263 |
328 |
590 |
2 |
GGCCTCCTTCCAAGCTTATT |
59.688 |
20 |
AGGTGACATGCACTTCCACA |
60.162 |
20 |
228 |
363 |
590 |
3 |
GCTTATTCCCAACTGATCGC |
59.674 |
20 |
AGGTGACATGCACTTCCACA |
60.162 |
20 |
215 |
376 |
590 |
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