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Simple sequence repeat (SSR)
>UN01547
GGAAAGGTCACGCATTTCGGCACTGCAAAGTTCGCTGAATCAAAGTTTTCTCTCTCTACGTTTTTTGTTTTCCTCCGAGAAACTCTCTCACACT
CGAATCTCGAAGCTTAAATTTCGGATCTTACTTACTTACTTACTTACAGCTGTCTCCTCGAGGAGACGACGACCATGAGCAGAGATCATCCTCC
CGAGCCTCTTGATTTCTTCATCTGGACTGTTGAGGACGTTGGATCTTGGCTTGAGGAGATCAACCTTGGGAGCTACCGCCTGATTTTCAAAGAG
AATGGTGTCAACGGAGAGTATCTGGAAAGCATGTCTGTGTTCACAACGGAACATATCCTTCACTTCATAAGGAGGCATCACATTAAATGGGGAG
ACTTCATCACCCTCTGCAAAGAACTCAGGAGGATTAAAGTGGCTTGCTTGAAAGGTGAACAGAGAGTTCGACGGCCATGGTGGGCACCTTCTTG
CCTCTCAGTAGTCTTTGTTAAGGCGGCTAAGCGCAACCGTCAGTCTCGTGTTGTATCTCTAAAGCTTGAGTCTTGACCATTTTTACACTTTGGA
TGTTTATGTACCTACGTACTTGTCTCTCTATCTCTTCTCTTCTCTTCTCTTCTCTTTTTTTTTTCTGGTTTGGGGTTTGTCTGTGGAGA |
Primers for UN01547 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATTTCGGCACTGCAAAGTTC |
60.257 |
20 |
CCCAAGGTTGATCTCCTCAA |
60.042 |
20 |
245 |
14 |
258 |
2 |
ATTTCGGCACTGCAAAGTTC |
60.257 |
20 |
GGTTGATCTCCTCAAGCCAA |
60.195 |
20 |
240 |
14 |
253 |
3 |
ATTTCGGCACTGCAAAGTTC |
60.257 |
20 |
TCCTCAAGCCAAGATCCAAC |
60.195 |
20 |
232 |
14 |
245 |
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