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Simple sequence repeat (SSR)
>UN15110
GCTTAGTTTGGAAAGGGTATGCTTATATATAGTAAACCACTGACTTCCCTTTGCATACATAACTCACACAAGTAAACATCATGAGTAAATCCGA
CACATAACTCATGCAGCTTTGGTTAAGATAGTTGAAGAAAGCATCTCATTCCAGATATCCGGGACACCAGGCAAGCACCAGTGACTACAATCTG
GCGAAGGTCCAGCGAAACGATGGTGCTTCTCTTCCTCGCCCATAGCTCTCTTAAACACCGATGGATGCCCGTCTCTCCTGTACGCCGACATTGT
TGTGATATCGTGCAAATACACTCTGTATTTCATTCTCGTAAGCACTTTTTTCAAAACTCTTGATTGTTGAGGAACATGTGGTTCGCTAGAAGAA
GGCAATGGATGTTTCTGGTTATAGCACTTTTGACCACTCTCTCTTGGTGAGCTTGTGCGAAAAATGACTTTAGTTTTGGATGGATCAAGATTAA
TCTCTACCCATTCAGCCCATGTGGTTAGTCCTCTTTCATAAGCAACCATTGGGTTCATAGCTTTGTAAAGCTTGTTCCCATCTTTGTAATAGTC
CCACGAACTCCGTTTCTGAGAGTGAGTCCACCAGTGAGCAGAATCGAACACAAGAACATCAACACCTCGCCAGTATCTAGCATTGTCTTCAATT
GAGTCCAAATGTAACACTCTTTCACGGTCATTTCCTTTCTTGAGTTCCACAAGCAGAGGAGCCCAACAGAATTCAATTGATGTCTCAAAGTCCA
GAGAATGGAAAGACATTGTAGGACCATTGTAAGTGAGCTTCTTACGATGAGTGGGAAGCACAGACTGTACTAAACAGACAAGAGATTCCCACTG
GTTCCTCATTATTGAATCTCCTACCAGCATTATTCTTTTTTGCCTCATTTTCCCAAGAAATTTCAATGCGTCAAACCTTGAAAGTGAGCAAGAC
TTAGGGACCCATCTCCATTTCTGGTAATAAGAGTCAGGCCTTCCATTTCTCTGACAACTTAGCGCAGAGCTCAAGTACGGACAGTTTGAATCGT
AGAGAGGATACGTTTCGTCGTAGCTCCATTTTCCCTCTGAGTAATCACACTTCCCCTCCGTTCTTTCGTGCCTTGTCTGCAACGCCCTGAGTGG
ATCGTCATCGTCGTCGCCGACTAGCCATAACTCATCAAGCTGCGACGTTGCTTTCTTGCTAAGTATGAGACAGAGTGAAAAGAAGAAGAAGAAG
GCTCGAGTGTTTAAGGTAGCCATTTTGAGTAAACTGACTTAAGCTAGTGTGAGTCC |
Primers for UN15110 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACACTTCCCCTCCGTTCTTT |
59.972 |
20 |
TCAAAATGGCTACCTTAAACACTC |
58.801 |
24 |
170 |
1081 |
1250 |
| 2 |
ACACTTCCCCTCCGTTCTTT |
59.972 |
20 |
CTCAAAATGGCTACCTTAAACACTC |
59.644 |
25 |
171 |
1081 |
1251 |
| 3 |
ACACTTCCCCTCCGTTCTTT |
59.972 |
20 |
TCAGTTTACTCAAAATGGCTACCTT |
59.644 |
25 |
179 |
1081 |
1259 |
|
|
