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Simple sequence repeat (SSR)
>UN15156
GGGTTACGAAAAAAATCAGAACACTTCCATCTCAATCTCAATTCTCAACCATAGATCCAAACCTCCCAACCTTTTTTTTCTTCCCGGAAACCAC
AAGAAAGAACAATCACGATCTTCTATCTCCCCGGAAGAAGAAGAAGAAAAACAAACATGTGTAGTAAGATGGCGTTTACTCTAACAATCCCTCG
ATTTCACTCTCCAATTTCTCGCAAACCCACCACCACCACCACTTGTTCATCTCCTCCTTCGAGGACACAGTCTGCTCACTTCAGCCATGAACGA
TCCATTTCTCTCAGACGAAGACTTTTCTTGTTACCCGTCAAAGCCACTACCGATCAGTCAGGTCAAGTGGGTGGGGAAGAAGTTGACAGCAAGA
TCTTACCTTATTGTAGCATCAACAAGAACGAGAAGAGATCAATCGGTGAAATGGAGCAAGAGTTTCTCCAAGCGATGCAATCATTCTATTACGA
AGGCAAGGCGGTTATGTCTAACGAAGAGTTTGATAACCTAAAAGAAGAGTTGATGTGGGAAGGAAGCAGTGTTGTCATGCTAAGTTCCGATGAA
CAAAGATTCCTTGAAGCTTCAATGGCTTATGTATCTGGCAATCCAATCATGACTGATGAAGATACGACAGCTGAAATGAAACTAAAGATGGATG
GAGTGAGATTGTGTGTGAGGTCCAGATGCAGTCTCGTAGTAAAAGTTACAGTGATCTGCAGTAGATATTCAAATGTCTGTGATGTACAGCAACC
GTTGTGCTCTCGGACTGTTTT |
Primers for UN15156 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCGGAAACCACAAGAAAGAA |
60.081 |
20 |
GGTAGTGGCTTTGACGGGTA |
59.993 |
20 |
250 |
84 |
333 |
2 |
CCGGAAACCACAAGAAAGAA |
60.081 |
20 |
GTTCATGGCTGAAGTGAGCA |
59.992 |
20 |
197 |
84 |
280 |
3 |
CCGGAAACCACAAGAAAGAA |
60.081 |
20 |
TCGTTCATGGCTGAAGTGAG |
59.984 |
20 |
199 |
84 |
282 |
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