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Simple sequence repeat (SSR)
>UN01547
GGAAAGGTCACGCATTTCGGCACTGCAAAGTTCGCTGAATCAAAGTTTTCTCTCTCTACGTTTTTTGTTTTCCTCCGAGAAACTCTCTCACACT
CGAATCTCGAAGCTTAAATTTCGGATCTTACTTACTTACTTACTTACAGCTGTCTCCTCGAGGAGACGACGACCATGAGCAGAGATCATCCTCC
CGAGCCTCTTGATTTCTTCATCTGGACTGTTGAGGACGTTGGATCTTGGCTTGAGGAGATCAACCTTGGGAGCTACCGCCTGATTTTCAAAGAG
AATGGTGTCAACGGAGAGTATCTGGAAAGCATGTCTGTGTTCACAACGGAACATATCCTTCACTTCATAAGGAGGCATCACATTAAATGGGGAG
ACTTCATCACCCTCTGCAAAGAACTCAGGAGGATTAAAGTGGCTTGCTTGAAAGGTGAACAGAGAGTTCGACGGCCATGGTGGGCACCTTCTTG
CCTCTCAGTAGTCTTTGTTAAGGCGGCTAAGCGCAACCGTCAGTCTCGTGTTGTATCTCTAAAGCTTGAGTCTTGACCATTTTTACACTTTGGA
TGTTTATGTACCTACGTACTTGTCTCTCTATCTCTTCTCTTCTCTTCTCTTCTCTTTTTTTTTTCTGGTTTGGGGTTTGTCTGTGGAGA |
Primers for UN01547 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCCTCTGCAAAGAACTCAGG |
59.982 |
20 |
ACAGACAAACCCCAAACCAG |
59.861 |
20 |
263 |
386 |
648 |
| 2 |
CCCTCTGCAAAGAACTCAGG |
59.982 |
20 |
CAAACCCCAAACCAGAAAAA |
59.811 |
20 |
258 |
386 |
643 |
| 3 |
CCCTCTGCAAAGAACTCAGG |
59.982 |
20 |
GACAAACCCCAAACCAGAAA |
59.807 |
20 |
260 |
386 |
645 |
|
|
