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Simple sequence repeat (SSR)
>UN15172
CAAAGCCAAATAGATGTCACTATCTCAAGATCAGTAATACAATAAAGAAATTATCACTGATCACAAACATCACATAACAAAGAGGAAACAAAAA
GCGAGAAAGTTTCTGTTCACTTCTTCGAAGAAACCGTCGATGATGATGATGATTCCGGCTCTTTCCAAGCCGCTTGCCACTGCTTGTCATACAA
CGTCGTCTCTTCAAATAGACCCTTGAGCTTATCTAAATCTTCGTTCTTGCGGATGAAAAGAACTCCAGCTACAGCCACAGACAAGAGCGTTTTG
CAAAAGAAGTTTCCCATTTGATCAACAAGTCCTACTCCGGTAAGGCTGTCAACAAAGTAAGCCATGAAGAACCCTATCATCGCAGCACGACCAT
TGAGGAGTTCAGCTTCTGGTAGATGGTATCGCTTCATCCATGCCCACCATGGAATGATGGAGGTATCGAAAAGAACAGGCTCGGCGTTAGTAGT
TGTTTCTGGGTTATCTTCAAGCCACTTCCTCCTCTTTGCCTCAGCGACGATAACAGAATCCCAATCTGTTTTCCCGTCTTTCTCGAACTGTTTC
AGATCCCAAGTCCCATTAACCCACTTCGCATCCTGAAACTTGATCTCCGTCGTTGTGGTTGTTGGTAGATCAGTCTCTTCTCCTCCGTTTTCAG
ACGCGGAGGAGCTTTCCGCCGGCGGAGATTTGACCGGAGGAGGAAGCTCGAGTGACGGAGAGGAGGGAGAAGCGCTTTGTGGAGAGGAGAGAAA
GTGAGAGTGAGATCTTGGGGGTGAGATTAGGGTTTTGAAATGATGAAGAAGAGATCGGAGGAGAGAAGAGCGCCATGGATATGGACATTTTGTT
GCTCTCTCTCGTCTGCTCTCAGTTTTTGGGAGTTGGTTTTGAATGTGTGGTTTCC |
Primers for UN15172 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAAAGAGGAAACAAAAAGCGA |
59.5 |
21 |
TATGACAAGCAGTGGCAAGC |
60.019 |
20 |
108 |
78 |
185 |
2 |
CAAAGAGGAAACAAAAAGCGA |
59.5 |
21 |
TTGTCTGTGGCTGTAGCTGG |
60.049 |
20 |
195 |
78 |
272 |
3 |
CAAAGAGGAAACAAAAAGCGA |
59.5 |
21 |
AAACGCTCTTGTCTGTGGCT |
60.058 |
20 |
203 |
78 |
280 |
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