 |
Simple sequence repeat (SSR)
>UN15222
GGAAAGGCATTGACGACGAAAAAAAAGCCTTCTTCGATCTACACTTCTCTTCTCTTCTCTTGTCTCTCTCTCTCTCTCCCATCTAACCTCTCGC
AGACAAGGTTGGTAATGGCAGAATCATCCAAAGTCATTCATGTTCGTAATGTTGGACATGAGATTTCTGAAAATGATTTGCTTCAGCTTTTCCA
ACCGTTTGGTGTCATAACTAAGCTCGTGATGCTCAGGGCAAAGAATCAGGCTCTTCTCCAGATGCAAGATGTTTCTTCAATCACTGCTCTTCAG
TTCTTCACTACTGTCCAGCCAACCATAAGAGGAAGGAATGTGTATATCCAATTCTCGTCTCACCAAGAATTGACAACAGCCGAGCAGAATATTC
ATGGACGTGAAGATGAGCCGAATCGTATTCTCTTGGTGACAGTCCATCACATGCTGTATCCAATCACCGTTGACGTCCTGCATCAAGTTTTTTC
TCCCTATGGATTTGTGGAGAAGATCGTCACTTTCCAGAAGTCTGCTGGTTTTCAAGCTCTTATACAGTATCAGGCACAACAGTGTGCTGCCTCT
GCTAGAACTTCTCTACAGGGTCGTAACATATATGACGGGTGTTGTCAGTTGGATATCCAGTTCTCCAACCTTGAGGAGCTGCAAGTAAATTACA
ACAACGATCGATCTAGGGATTATACAAATCCAAACCTGCCATCAGAGCAAAAAGGCCGTTTACCTCACCCTGGCTATGGTGATGCAGGAGTGGC
CTATCCTCAGGTGAGTAATGCTAAAAGCTCCATGATACACGGTTTTAGCAACGATTTTGTTCTCTTAAATCTCATGTATTTGCTGTTATTTAGA
TGGCAAACACATCTGCGATTGCAGCTGCCTTTGGCGGTGGCTTGCCTCCGGGTATAACTGGCACAAATGATAGGTGTACAATCCTTGTCTCCAA
TCTTAATACAGATAGTGTTGATGAGGATAAGCTGTTCAATCTCTTTTCTCTTTACGGGAACATTGTGAGGATAAAGCTTCTTCGAAACAAACCT
GACCATGCCCTTGTCCAGATGGGAGATGGTTTCCAAGCTGAACTTGCAGTTCACTTCCTCAAGGGAGCGATGCTGTTTGGTAAGCGGCTAGAGG
TGAACTACTCGAAGCATCCAAATATAACACCAGGCACAGACTCGCATGATTATGTTAACTCGAACCTGAACCGTTTCAACCGCAATGCTGCAAA
GAACTACCGCTATTGCTGCTCCCCTACCAAGATGATTCACTTGTCCACTTTTCCGCAAGACGTGACAGAGGAAGAAGTGGTGAACCACGTCCAA
GAGCGTGGAGCCATACTGAACACAAAAGTGTTTGAGATGAACGGGAAAAAGTAAGCTCTGGTGCAGTTTGAGAACGAGGAGGAAGCTGCGGAAG
CACTGGTTTGCAAGCATGCGACCTCTCTAGGAGGTTCAATTATCAGAATCTCCTTCTTTCAGCTGCAGACAATTTAAAGTCGACAAAGGCCTCT
CTCTCTTTTCTCTCTCTCTCTCACCTCTAATGACATTTGGGTATGGTGAGGATGATGAATGTGTGTTTGTTTAACTCAAATATTTCTGCTACTT
GTTTGGACTTTTCTACACTCTTTTTTTAAACTTGGTCCCTTGGTTTAAATTTGTTTGTGCTGATTTAATGGTAATAAACATTTAAGGC |
Primers for UN15222 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGGTGCAGTTTGAGAACGAG |
60.025 |
20 |
CATCATCCTCACCATACCCA |
59.166 |
20 |
187 |
1375 |
1561 |
| 2 |
TCTGGTGCAGTTTGAGAACG |
60.025 |
20 |
CATCATCCTCACCATACCCA |
59.166 |
20 |
189 |
1373 |
1561 |
| 3 |
TGGTGCAGTTTGAGAACGAG |
60.025 |
20 |
CATCCTCACCATACCCAAATG |
60.059 |
21 |
184 |
1375 |
1558 |
|
|
