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Simple sequence repeat (SSR)
>UN15438
CGTTATTGTAAATGATAATTAAGTAAATTATCATGAAAGTCTTTTACAAAAACAAACGAGCAAATTCAAGTTTTTCTCTTCTCATATAATCCAA
TTATGCATTTAAAGGTAAAAGAAAACTTCATCAACAAGGAACTGGAGAAGAAGAAGAAGAAGAAATTGTTAGGGCTGACTGTAGATTTATCTTC
CTCTCGAGAGAGCTTTCTCAGCAGTCTCCATCTCTTCAAGAATCCTCGCCTTCCTCTTCGCCGGGATCGGAGCCGTCGGTCCAAAACTCACATA
ATGTCCAGACAAAGCATTCAACGCCGAGTAGATATCCCTGAAAGACGCTTTCCCGAGAAGAGCTTTCTCCTTCCTGTACTTGGCAACCCACGAG
TTCGACACTTCTCTCAGCTCAGCCACCGCGTCCGCCACATTCGGATCCGTCCTCTCCATCGAGAGCGTCGTCCGAACTTTGGAGATCACCGCCG
ACGTATCTTTCACGTACTCTTCGTCTTCGGCGGCGGAAGCGGGCGACGGAGCTAGAAACGGGAGCGATTGCGTCAGTAGAAGCGTCGATGCGGC
GGATAAGGAGAGTACATCGCGGCGGAGGAGGTTTTGGCGACGTGGAGGAGGAAGAGGAGGAGATACGGAGGCGGTGATGACCGGTTTATGCTGC
GGTGGAACAGGACTGGGTTTGAGAAGAGTAGCTGTCGCTGAAGCTGAAGCCATTGTCGGAACGCGCCC |
Primers for UN15438 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAAAAACAAACGAGCAAATTCA |
60.143 |
22 |
CGTTGAATGCTTTGTCTGGA |
59.84 |
20 |
259 |
47 |
305 |
2 |
CAAAAACAAACGAGCAAATTCA |
60.143 |
22 |
TCAGGGATATCTACTCGGCG |
60.192 |
20 |
277 |
47 |
323 |
3 |
CAAAAACAAACGAGCAAATTCA |
60.143 |
22 |
GAAGAGGAAGGCGAGGATTC |
60.293 |
20 |
201 |
47 |
247 |
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