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Simple sequence repeat (SSR)
>UN15443
GGAAGCCGGCACTCGCTTACTGCGTAAATACGTGTCGGTAGCGCGCAGAATCCAAATCATAAACGAAGAGGACCGAAGGAAAGAAAGAGAGAAA
GAAAGAAAGCGAAAGAGGGATCTAGAAGAAGAAGAAGAAGATGGCATTGCAATGGCTGATTCTCACGTACGTGGTAGCAGCGGAGGTCGCGATC
GCCGTCATACTGACTCTCCCTTACCCTATGCTTCTGAAGAAACGCGTCGTGTCACTCGTCTCCCTCATACTCCAACCCGCTGCCTCCATCGTCG
CCTTCGCCGGGTTTCAACTCCTCGATATTTATTGGAAGAATGAGTATAGACTAGAGTGCTCATCTGAGGTTTGCACTGCTACAGAGCGAGATCG
CTACGAGAAATCCATCTACAAGGCTCAGAGGAACGTGGTTCTGTGTGCGGCTGGGATCCTTCTCTACTGGTGTATTCATCGCATCTGCAAGTAC
AACAAAGACCTTGAGCATTTGGAGGAACTAGAGAAGAGATGCAAGGCAGAGTAGTAGTCTCCTTCTTCTGTTATTATATTACCTCGGCTTGTTA
GTAGACCACGATTTACCTCAGATGAATCTTTGCGCAGACCTTATTTGTGTTTCATCTTGCAACTTTGATTTACTTTTCGAGAAACAGCATGTTT
TATTTCTATTTTCGTGTCCGGAAAATTGACGTTTACATATTAGTTGCAATTATATGTGCATTTGCTTTGGG |
Primers for UN15443 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TAAACGAAGAGGACCGAAGG |
59.308 |
20 |
TATCGAGGAGTTGAAACCCG |
60.066 |
20 |
250 |
60 |
309 |
2 |
TAAACGAAGAGGACCGAAGG |
59.308 |
20 |
GGGAGAGTCAGTATGACGGC |
59.685 |
20 |
149 |
60 |
208 |
3 |
GCGCAGAATCCAAATCATAAA |
60.054 |
21 |
TATCGAGGAGTTGAAACCCG |
60.066 |
20 |
267 |
43 |
309 |
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