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Simple sequence repeat (SSR)
>UN15559
CAATGAAGAGGCAACCTCTGTTTTATTACATTAACATTAAGATTACATAAAAGCCGATATTTTTTATTACATTAACATTAAGATTACATAAAAG
CCGAGAAACATGATTCTTTTTTAGACACCACAGAAAACATAGTGCTTCTATTACACACACACTGAAGCAGATATATTTTTTTCACAAAGAGTTA
CCATTTAGCAGCCTCTGCAAGCAAAGCAGAAAACTTAAACCTCTTGATATTGAGTTTAACTTCCTCAGCACATAACTCTTTCCACTCATCGCTC
AGCTCTTTTCTTTTACCAGATCCAAGGTTCATCAACTTCTCAAGCTGCAATTTCTTTTGATAATCACTTAAACCTTTAGACACTATGGTCTCGA
ACGCATCCCGCACAGCCCATGTCTCGTCATTGCCTTCAAAGTCAGCTTTTGGTAATGATTCATTACCCATTTCATCACCATTCTTGCTGCTGTG
ATTAACAGACTGATCAGGTTCATTTTGGGGGGCCCATATCCTTTTGGAAAGTAGGAAGGCTTCAGATTTGCTGGTGTTTCCTTTCCGCATGCTA
ACAATGAACTTACCTTTCAGCTTGCGGATCTTAGTCAAAACCTGATCCTTCGAGTATATCGCAGTGATGGAATCACCGAGGAAACGGTAAAAGT
CAGCCCAGTTACTGTTGGGCTCGTTCCCTGTCTTGGCTCGATAATCCACTAACCCTTTTAAGACAGTGAGCTCATCTTCCTCGTTCCAGATTCT
GCTGCTGCTGCTGCTCGCCAATGTCTTCTTCTTCTTCTTCTTCTTCTTTGTCACTTGTTCTGCTGCTGCTGCTGGTTGTGGAGGAGAAGGCTCT
GAAGCTTGTTTCCGTGGGGATTTTCTGAGAATATGTGAAGGCGGAGATGCTCCGTCAGAGAAATCAAGATTCACCATGGGCATGGTTGGTCGCA
ATTCTCGCATGCAGAGAAGCCCTGATATTTTCTTTTTTGTTCCAATTTCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTTAG
ACAGAGAGAGAGAAAAAAATGGCGAGATTCACGGTGTTGATTGCGGCAGTGGTACTGGCCATTGTAGTGGCGGTGCCTGAAGTAACTGCGAAGA
AGTACACAGTCGGCGAGAACAAGTTTTGGAACCCCAACATCAACTATACCATTTGGGCTCAGGGAAAGCATTTCTACCTCGGAGACTGGCTCTA
TTTCGTGTTCGACAGGAACCAACACAACATTCTTGAAGTAAACAAGACCGACTACGAAAACTGTAACGCCGACCATCCTCTCGTAAACTGGACG
CGTGGAGCTGGGAGAGACATTGTCACTCTCAACGTGACCAAACATTACTATCTTCTCGACGGAAGGGGTGGCTGTTACGGCGGCATGAAGCTCG
CTGTTAAAGTCGAGAAGCTTCCTCCTCCACCGAAAGCGGCACCTGTCAAGAGCATTGGTTCAGTTTCCATGGCCACTGGTGTTGCTCAGTTCGT
GATCCCGTTTGCTCTTTTCTCTGTTTCCCCGGTGTGGGACGCCATCTTAAGGATGTGGTAAATGACCAATGCTCGGTCCGAGTCGGACCTCTTT
AGTTGGAATCCATTTTCGAGTTTAAAGAAACATCAAATTCTTTTTCAGGGAAAGCATTTTTAAGTTAGAAAGTTCATCAGCTGAGTTTATGTTT
GTAATGTTGGATTGTTGGTTTTTAATCTTTTGTTTTGTATGTCTCTTTGAAATCAATTGTTGAAAAATGTTGTATTTTGATTTACTTGAGATTG
ATTACATTTAATTATTGGAACTTTCATTTAAGATTG |
Primers for UN15559 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGCTCATCTTCCTCGTTCCA |
59.95 |
20 |
CTTCAGAGCCTTCTCCTCCA |
59.673 |
20 |
124 |
727 |
850 |
| 2 |
GCTCATCTTCCTCGTTCCAG |
59.95 |
20 |
CTTCAGAGCCTTCTCCTCCA |
59.673 |
20 |
123 |
728 |
850 |
| 3 |
GAATCACCGAGGAAACGGTA |
59.933 |
20 |
CTTCAGAGCCTTCTCCTCCA |
59.673 |
20 |
217 |
634 |
850 |
|
|
