 |
Simple sequence repeat (SSR)
>UN01600
GAGGTTTATATTTTTTTTTTCCGCTGAATTATATTATTAAATTTTCAAAGCAAAAAGTTCTAAACAATGAGAACCAACAAAACAACAATAAGGT
TTATCTTCGTGCAATGAAAAGAAGACAAATGAATATGTAAAAGCATATATATGCACAAAGAATGAGAGTTTGAGACAATGCAATCTTTTAGAAA
CTTGGTTTGTTGATGAAGTCTGTGTCCACCGAGCTAACAGGAACAACAGCAGGAGCTTTAGATGAAGTGTCATCAAGCTGAATAATCTCTTTCC
TCCCCTCTCCTCCATTCTCAGCTCTAACGGCCTTTGTCACTGCACCGAACGCGTTTGATAACCAAGAAGCTCCGCTCGAGACGTAAGGGTTAGC
CATCAGAGCTGTCCCTGCGCTGATCGCTCTCTCCTCAGCAGCTGCTAACGCGGATTTCGTGATCTCCCTCACTTGATACCGTTCGTCCACCTCT
CTCAGCTTCTCGTTCACCACGGTTGTTCCCATGCTTAGCTTCTCGCTCAGACCAATCTTGCTGTCGAGGGAGGCGATGGTTGCCGAGGCGTTGG
AGACCAAGTTGTGTTTGTCGTCAAAGGCTTTGGCTTTCTCCATGGCGTCTTTGCCGACGGCGTAACCTCTTTCCATCATAATACTTACTACATG
TTCAGCTTTCTTGACAGTGAAGCCATTGAATGAGTATTCCGAGTCAAGTGCAAGGGCTTCTGGTGGTAGCTCGTAGTTCACAGCAGGTGTAATA
CTAACACGATGATCAGCAATGACAGCTCCCGTTAAGAGCATAGCAGTTTCTGCGCCTTGTGGATCCTTGAAAGTAACATAAGCAAGCTGAGTTT
CTTGCGTCTCGCTTCGCATCTCGATGTAGTGAATGTCACCAGAGAAAGAAAAGAACTCATTGAGATCTTTCTTGGAAACGTTGAGTGAAACGTT
GCTAATCTTCACAGTTTTCACAGGGGAAGTAGTAGTAGTAGTAGTAGGCTGGGAATCCATGAGGATGTTGTGGTGAGATTGATGATCTAAAGGA
ATGAAAGCAGCCGACATTGTCGCAGGAGCGGTGGAGAAAGTGTTCC |
Primers for UN01600 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGATCAGCAATGACAGCTCC |
59.95 |
20 |
CAACATCCTCATGGATTCCC |
60.135 |
20 |
249 |
762 |
1010 |
| 2 |
TGATCAGCAATGACAGCTCC |
59.95 |
20 |
AACATCCTCATGGATTCCCA |
60.135 |
20 |
248 |
762 |
1009 |
| 3 |
AGTTTCTTGCGTCTCGCTTC |
59.763 |
20 |
AACATCCTCATGGATTCCCA |
60.135 |
20 |
168 |
842 |
1009 |
|
|
