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Simple sequence repeat (SSR)
>UN15632
GGCTCAAACGAGAAACCTAAGAGTTCAGATTAACTAATGTACACCTGATGATGTTCAAAAGAGCACAACACACTAACAAAGGAAACTAAAGAAA
AAGATAAGCAGTCCAAGACTAAACAAACACAAACACCCATAAGCTACTAAATTAGCATATCACATAACCCACAGTGCCTAAGAAAACAAATCAC
TCCTTGATGGTTTTGTTGATGAGAGACTTGTGGATGTGAGGGATCACACCTCCTCCAGCGATGGTTCCCTTGATGAGCGTGTCGAGCTCCTCGT
CTCCTCTGATAGCCAGCTGCAAATGCCTTGGAGTGATCCTCTTCACTTTCAGATCTTTGCTCGCGTTTCCAGCCAACTCAAGAACCTCCGCAGT
CAGGTACTCCAGAATCGAAGCCGTGTAGACAGCGGCAGTGGCACCAACCCTTCCGTGTGCTGAAACTCTCGTCTTGAGTTGCCTATGGATACGA
CCCACCGGAAACTGAATACCAGCACGAGCAGAGCGAGTGATGGGTTTCTTCTTGTTGTCCTTGTCTTTGTCCTTGTTACCGGCCATGGTCTTGG
TAGCGATGAGACCTTTACCTCCCTTGCCTGCCATGTTCGCTCGCTGTTGATGCTGCCCACTTTATAGATCTGAGACGGAGAGAGAGAGAGAGTG
TGTGTGTGGAAGGAGACGAATAAACTAAATCTCC |
Primers for UN15632 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCTTTGTCCTTGTTACCGGC |
60.11 |
20 |
TTTATTCGTCTCCTTCCACACA |
59.609 |
22 |
149 |
534 |
682 |
2 |
TCTTTGTCCTTGTTACCGGC |
60.11 |
20 |
ATTCGTCTCCTTCCACACAC |
57.545 |
20 |
146 |
534 |
679 |
3 |
GACCCACCGGAAACTGAATA |
59.79 |
20 |
TTTATTCGTCTCCTTCCACACA |
59.609 |
22 |
214 |
469 |
682 |
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