 |
Simple sequence repeat (SSR)
>UN01616
TTTTATACAAAACAAAAAAAAAATCTCAGCCATGTCAAGTGGAGGAACGGTGAGAAGGGTCTCACGTCAAGATATACAACTGGTTCAAAACCTT
ATAGAAAGATGCCTTCAACTCTACATGAACCAGAAAGAAGTCGTGGAAACTTTACTGGAGCAAGCTAAAATCGAACCTGGTTTCACAGAACTAG
TTTGGCAGAAGCTTGAAGAAGAGAATCGTGAGTTTTTCAAGGCTTACTATCTTAGGCTGATGGTGAAACACCAGATCATGGAGTTCAACAAGCT
ACTCGAGCAGCAGGTTCAACACATGCGGCAGATGCATCCGAGTGGAGTCACTTCCGTGCAAAACACAAATGGTGGTTCTCATATTCAATCAAGT
ATTAATCAGAAACATTTGGGTTATGCCTCTGAGCACACTGATCAATCTTTGAAGTCGATATCCTCGAGCCTGTCTAATGCATACCTCAATGGAT
CTTCAACGCTCAATACAAATAATGTGGCCCTTCTTCTGTGAACATATCAACCCCATGGTAGGAGAGTTTGATGCTTCTCCCTCCCTCCCGAATA
TACTCTCATCATCGCAGACCACTACAAACATGCCTGTGATGATGCATGGAATGAATGGAGGAGGAGGAGGGGGAGGAGGGATGATCAAGTCTGA
GACTGCCTTTACAAACAACCCTGCTTCTTCATTCATGTATGGTGGTGGTGAAAGGAACGTCTTGCAAGGGCATTCCACAGTTAGAGGAGACTCT
TCGATCCTCTCATCTTTTGGTAATGAGTCCAACAACAACAACAACCAACAACCTCTCAGTGAGACGGTTCTTGATGCAGAAGCTGCTACTTTTG
GGTTCTTGGGTCAAATCCCTCGGAACTTTAGCCTCTCTGATCTGACAGCTGATTTTTCTCAGAGCTCAGAGATTCTGGAGAGCTATGATAAGTC
ACCCTTCCTTGTGCCAGATGCTGAAAACTTCCTGGACTCCTGCGACAGGGGAGAATATCAAGGAGATAACAAGAGATTGGAGACCATATCTGAA
GGTTTCAGTTATGATAACCTTGGAAGCGAGTAGTTAGGTAACAGGTTTTGCTTCACTACTCATGATGTAAGATACGTTTGGGTATAACATATTC
AGGCCTCTGATCTTTTCCTTGCAACAGAGACTATTGGGTGGGTGTATAAAATGGGATTTTATATTTTAACATTATTACTTTAGCTTAGAGTTTA
TAAGTTTGAGATGATTATATGTAATTTCCAGTGTGTGATTTTGCATGCATCTTTTCTCTTGTGTTTTAGTTTTTCTTTTAACTTGTTATAATTT
TTGTGTCTTAAGTGTGATTTAACTGATTATGTTAAGAATGAAAGTTGTGGTAGTGAAGCAGTAGCTAATGCATCAAACTCAGTTATGTATGATT
TTAATTTTTTGTTGCACAAGTTATGGTAGTAGTTGGTGTTCTA |
Primers for UN01616 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGGAATGAATGGAGGAGGAG |
60.003 |
20 |
CTGCATCAAGAACCGTCTCA |
59.984 |
20 |
221 |
611 |
831 |
| 2 |
TGGAATGAATGGAGGAGGAG |
60.003 |
20 |
TTGACCCAAGAACCCAAAAG |
59.942 |
20 |
250 |
611 |
860 |
| 3 |
TGGAATGAATGGAGGAGGAG |
60.003 |
20 |
AGAGGCTAAAGTTCCGAGGG |
59.842 |
20 |
272 |
611 |
882 |
|
|
