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Simple sequence repeat (SSR)
>UN15788
TTTTTTGGTCACTATCAGATTCTCATCAGTTGCAATGTCCAAGAACAACGGAGCTCGTAGCTGTTTAGGCTCGATGGACGACATCCGCGTCGTC
TTCCAGCGATTCGACAAAAACGGAGACGGAAAAATCTCCGTCGACGAGCTCAAGGAGGTGATCCGCGCGCTGAGCCCCACCTCGTCGCCGGAGG
AGACAGTGAAGATGATGAAACAGTTCGATCTGGACGGAAACGGATTCATCGACATGGACGAGTTCGTCTCTCTTTTCCAGATCGGAATGAGTCA
AGGAGGAGGAGGAGGGAACAGCAAGAACGATCTGAAGGAAGCGTTCGAGCTGTACGATCTGGACGGTAACGGGCGGATCTCGGCGAAGGAGCTT
CACTCGGTGATGAAGAGTCTGGGGGAGAAGTGTTCTGTTCAGGACTGCAGGAAGATGATTAGCAAAGTTGATACGGATGGTGATGGTTGCGTTA
ACTTCGAGGAGTTTAAGCTGATGATGAAAAACGGCGGAGCTTGATGATCGATCGTATTAGGGATTGTTTGTATAGAGGAAAGCTAGAAAAGTTT
GGTTTTATGAGTTTTTTTTTACTTTATGTGCTACAACTTCCCTTATTCACTATTGAGATGTTCTGATGGGCCTGACTTGCGAAAAAAAAA |
Primers for UN15788 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAAAAACGGAGACGGAAAAA |
60.081 |
20 |
TACAGCTCGAACGCTTCCTT |
60.154 |
20 |
228 |
109 |
336 |
2 |
GACAAAAACGGAGACGGAAA |
60.088 |
20 |
TACAGCTCGAACGCTTCCTT |
60.154 |
20 |
230 |
107 |
336 |
3 |
ATTCGACAAAAACGGAGACG |
60.11 |
20 |
TACAGCTCGAACGCTTCCTT |
60.154 |
20 |
234 |
103 |
336 |
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