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Simple sequence repeat (SSR)
>UN15848
ATCCGTGGAAAAGAGGAAAAAAAACTGGGTTGAGAGAGGAGAATCGTAGTCATTACAGAAGTAGAAGAAACCCAATAGTCTTGAGTAGAGATAC
AATGGAATATAAGAAAATCTGAAAGGGTGTTTTTGCTGCTATACAGAACCAAAATGGGGGGTAAAAGATTTCATTGTCTTCGTGCAAATATGAG
AAGCCTTCATCATCAATCAATCATCTTCCGGATGAGGAGCTTGATCATCATCATCATCATCATCATCCGTTGACTTCTTTTTCTCGTTCCTCTC
ATTCCATCTCGCCCAAGCCCACTTCAGGGCAAGAAACCCTCCAAGTGCATATACCTGCCAAATGACGAGGGAATTGGAAGTGGTCCCGGAGCTA
GGCTCGGCTTCAACCTTGAGTGGCTCAGTGCTCTTGGGAGGATTGTAAGGGAAAGTGACCGTCGAGTTCTGAGTCTCCTTATCTCCTCCCGTGG
GTTTAGGACCACCATCGGCAACGTTAGCAGAAGAAGCAGGGGACTTAGGTTTGAGGAAGGGGAACAGGTTGACGACGAAAGAAGGTAAGTTCAG
CTGAGGAGGAGGAGGAGGATCGGGTTCAGCCATAGTTGTTGTGGTGTTGTTGAGGTGAGGATGGCACCGCTTCC |
Primers for UN15848 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GAAAGGGTGTTTTTGCTGCT |
59.359 |
20 |
CCTCGTCATTTGGCAGGTAT |
59.955 |
20 |
238 |
115 |
352 |
| 2 |
GAAAGGGTGTTTTTGCTGCT |
59.359 |
20 |
AGGGTTTCTTGCCCTGAAGT |
60.11 |
20 |
208 |
115 |
322 |
| 3 |
GAAAGGGTGTTTTTGCTGCT |
59.359 |
20 |
GCGAGATGGAATGAGAGGAA |
60.303 |
20 |
180 |
115 |
294 |
|
|
