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Simple sequence repeat (SSR)
>UN15954
TGTATCACATATCTGCTACGATGGCATTACACAATATTGAAACTTCACCAATTTCTAAACCAAACTAAAAAATTACAAAGAAATAGAAAGAAAA
CTAACTACACTTCACATTTACCAAAAACATCATATTGTTAGACAGTTTAAGATAACAGTAAACAGCAGACAAACTTGATTTACTGCTGCTTCTG
TAGTAATAAGTTGCCACACTGCCATTTTTTCATTTCTGTCTTGAAATCATCATCACTACTATTATTATTGTAAAATAACTGAAACAGCTGAAGA
AGATTCATCTCCTCTCATCGGTCTCTATGATAAGATACACCTTCAAGCTTTAACGCAGCAGTTGAAGCAGCTGAAGATTCCTCTCCTCGCAGAT
GGAGAAAGTGGCTGGTGATGAGAGAAGTCATTGTGGGTTTTGTTGTTGTTGTTGTTGTTGTCACCGTGAACAGTGGTGAGCTTAGGCTTAGCAT
TATCAACCGAAGTAGGTTGATTATGAAAAGGATTAACGAGTTCTTCCTCGTTGCCAAGACTGGCACGAGAAGGATCTCTCTTGTTCTGTTTCCG
CATCTCTCTGATCTTAGAGAAATCCATAGAGTAATCAGGAATGGTTCCTCCTTTCTGATCCCAATCTCCAAACTGTGGTACTGATAGCCATGGC
GAGTTCTTGTTCTCCTTTGGATCTTCCATATGATCAAATCTGTAGAGAGTAGTAGTAAAGAATCCTCCTTTTCTGAATTAACTTTTTCAATCAA
AAGAAGAAGAAGATGATGATCTTCC |
Primers for UN15954 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCCTCGCAGATGGAGAAAGT |
59.95 |
20 |
AGTCTTGGCAACGAGGAAGA |
59.989 |
20 |
166 |
366 |
531 |
| 2 |
CTCCTCGCAGATGGAGAAAG |
60.088 |
20 |
AGTCTTGGCAACGAGGAAGA |
59.989 |
20 |
167 |
365 |
531 |
| 3 |
CCTTCAAGCTTTAACGCAGC |
60.152 |
20 |
AGTCTTGGCAACGAGGAAGA |
59.989 |
20 |
210 |
322 |
531 |
|
|
