 |
Simple sequence repeat (SSR)
>UN15996
GCATCACCTCCCTCTCTGTTCTCAAACTAAATAATCGATCCCTCAATCACTCAACGAACTCTCTCATCTTTCGACCGATCTAAATCGAAACCCT
TTTTATTCTCAAAATAATCTCACTGAGATGAGCTCCGAAACGTCGGCGGCTGGAGACGGCGGCGAAACGAGCGCCGGTCCATCACCGGCGTACG
ACAAACAGAAGGAGAAGGCGCGCGTGAGCAGAACGTCTCTGATCCTGTGGCACGCGCACCAGAACGACGCGGCTGCGGTTCGGAAGCTCCTGGA
GGAAGATCCGTCTCTGGTTCACGCCAGAGACTATGACAAGCGAACGCCTCTCCACGTGGCGTCTCTTCATGGGTGGATCGATGTCGTCAAATGT
CTGATCGAGTTTGGTGCTGATGTCAACGCTCAGGACAGGTGGAAGAACACGCCTCTGGCTGATGCAGAAGGAGCTAGGAAGCAGAAAATGATCG
AGCTACTTAAATCTCATGGCGGTTTGTCTTATGGTCAAAACGGGAGTCACTTTGAACCAAAGCCTGTGCAACCACCAATTCCAAAGAAATGTGA
CTGGGAAATTGAACCTGCTGAGCTGGATTTCTCTAATGCAGCCATGATTGGAAAGGGTTCATTTGGTGAGATTTGTGAAAGCCTATTGGAGAGG
AACACCAGTTGCTGTCAAACGTATTCTTCCCTCTCTCTCAGATGATAGACTGGTTATTCAGGACTTCAGGCATGAGGTTGATTTGCTAGTTAAG
CTTCGCCATCCCAATATAGTGCAATTCTTAGGAGCCGTTACCGAGAGAAAGCCCCTTATGTTAATCACTGAATACTTACGCGGGGGAGATCTTC
ACCAATACCTCAAAGAAAAGGGTGGTCTTACTCCAGCAACTGCTGTTAACTTTGCCTTGGACATCGCTAGAGGAATGACATATCTTCACAATGA
ACCTAATGTTATCATTCACCGAGATCTTAAACCGAGGAACGTTCTTCTGGTTAATTCGAGTGCAGACCACTTGAAAGTTGGAGACTTTGGGCTT
AGTAAGCTCATAAAGGTTCAAAACTCTCATGATGTCTACAAAATGACTGGAGAAACCGGGAGCTACCGGTATATGGCTCCTGAAGTATTCAAGC
ATAGAAAATACGACAAGAAAGTGGACGTCTTCTCCTTTGCAATGATACTTTACGAGATGCTAGAAGGAGAGCCACCATTTGCGAACTACGAGCC
GTATGAAGCGGCCAAACATGTATCAGATGGACACAGACCTACTTTCCGTTCCAAAGGATGCACACCTGATTTAAGAGAGTTAATAGTGAAATGC
TGGGACGCAGACATGAACCAGAGACCATCGTTTCTGGACATTCTCAAGAGACTTGACAAGATCAAGGAAACTCTGCCATCAGATCATCATTGGG
GCTTATTCACTTCATAATACACAAAAAAATCCTCTTCCTGAAAACAAGAAAGTGACATTCTGTTTGCTTATTATTATTATTATTCTATGTTAAA
ACATTGTTTATTCTCATTTGTTTCACAGTAAACGACTTAAAAAAAGTTGCGACATAAAAAAAGAAAGAAAAAAGAGACTTTTGTTGTTCCATGG
ATTGGATTGAGCATGCAAGTCAAATG |
Primers for UN15996 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCAGATCATCATTGGGGCTT |
60.426 |
20 |
TTGACTTGCATGCTCAATCC |
59.805 |
20 |
227 |
1395 |
1621 |
| 2 |
TCAGATCATCATTGGGGCTT |
60.426 |
20 |
TCCAATCCATGGAACAACAA |
59.75 |
20 |
210 |
1395 |
1604 |
| 3 |
TCAGATCATCATTGGGGCTT |
60.426 |
20 |
TCAATCCAATCCATGGAACA |
59.707 |
20 |
214 |
1395 |
1608 |
|
|
