 |
Simple sequence repeat (SSR)
>UN01645
CGCCGTTCGACGGCAATCTCGAATTTTTTTCCCCCACACGGCGGGCGATTCGCTCCGTGATGACTTGAACCGCCGATTACCCAACAACTTCCAC
TTTCCCCACAAACCCTAAGCTTTACTGTAGCATTGGTTCCCAAAACCCCCCCCGCTTGGGATTCGTGCTTTTCGCTACCTCGATTTCGTCCCCG
ATCTGCTCGAACTAGGGAAGACGAACCTGCAGCGATCTATTTCAAAGCCTTGTTTTCATTTCCCCCAAAAACCTCAATAATGATGACCTGTTTG
TGCTTGGGAGAACGGTCTTAGTTTATTAATTTAGCAGAGTTGGTTTAATATATATTGGAGTTGAGTCTGGTTCATCTATCAACAATGGAAGCAT
ACAGAGAGGAAGCTATTAGAGTGAAACAGGTCGCCGAGAGGAGATTCGCGGAGAAAGATTTCACTGGCGCCAGGAGCTATGCGTTGAAAGCTAG
GTCTCTGTTTCCTGATCTGGAAGGTTTGACTCAGATGATTGCGACTTTTGAAGTTTACCTGGCTTCTCAGTGTAGAAGCGGCGCCGGTCAGATC
GACTACTACGCCGTGCTTGGACTGAAACCCTCTGCTGGGAAAAGAGACGTGAAGAAACAGTACAAGAAGATGGCTGTCCTGCTCCATCCGGACA
AGAACAAATGCATCGGAGCTGATGGCGCGTTCCATCTCATATCTGAAGCTTGGAAGTTCTTGTCAAATGAGTTCAACAAGAGCACTTTTTACTA
CAAAAGAAGGAAGCATATCGAGTCTACGGTGGTTCAGAAGCACCACCGCGCAGAGTACACGCCACCGGGGACTGCAGCATTTGATCGGTTTCCA
TCATCATCATCATCAGAAAGACTCGACACTTTCTGTACTGTGTGCACCTCTTGCAAAGTTCAGTACGAGTACCTGAGGAAGTACGTGAATAAGA
GGCTTTCGTGTAAGAACTGCCGCGGAGCATTTATAGCTGTGGAAACCGGTCCAGCTCCTGTTAGTGCACCGTTTCATTACACGCCTCCATCTCA
TGCGCCTCCTCCTCCTCCTCTTCATAGTAATGGCTATAGCTCACATAGCTACGATGCACGCATGCCCACAAGTTCCACGTATCTCTTAGGCCAC
TATCCTACGCAAGGACATGGATATGAATATGGTTCATATGATTGGACCTCATCATCGTACCCTGAAACAACCACCTCCCCAGGGAATCTTGATT
TGAAGCGTGTGTCCTCTGTGTCCAATGGGTATCCTTACAAGCACAGCAAATCAGTCGTTAGCACGGGGATAAATAAAGTTAAAGACGGTTCCAA
CGGGACATGCTCGATGAAAACCAAACCAGATGGTCTGATCTATGCTAACCCGCCTGGCCTTTCTACTCATACGGCTGCAGTTAAGGTCGGCAGA
CCTGAGAAGAAGAGCAGAGTATTTATTGAATCGTCTGTTAATGGATTTGTTGAGAACCCTTTGATGAGATCTTCTGCTCCAGCGTCAAAGACAG
CGAACGCAGATTTCAAAATTCACGGGCAAAGCTATGGTTCAACTAGGCGGTGGTCTGCTGCATCAGTATTGGATACACGCAAGCCACTGCTTCA
GAAGGCAAGAGCAGATATTAAGCAAAGACTGGATATCATAAGATTGGCTTCAGAGGCAGCAGCAGCAGCAGCTGTAGAAGACCCGACACCAGTT
GATTCCTGTAAGTTGGGAGATGTCACGGCGGGGCGCGAAACCAGTGGGCCTATAACGGTACCAGACTCTGATTTCCATGATTTCGATAAAAACA
GATCGGAGGAGTGCTTTGAGCCAAGACAAATATGGGCAATCTACGATGAAGATGATGGCATGCCACGCCTGTATTGTGTGGTTAGGGAAGTGCT
CTCTGTTGAGCCCTTTAAGATTGACATAGCCTACTTGAGCTCCAAACCGACATCGAGTTTGGTTCCATGAAGTGGTACAATACGGGTTCACAAA
TCGTGCGGACATTTCAGATACAGACTATGACATAGTGACAGTCACATATCTCGCATCTTTT |
Primers for UN01645 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ATCCGGACAAGAACAAATGC |
59.939 |
20 |
TTGCAAGAGGTGCACACAGT |
60.51 |
20 |
253 |
650 |
902 |
| 2 |
ACTGCAGCATTTGATCGGTT |
60.667 |
20 |
GAGGCGTGTAATGAAACGGT |
60 |
20 |
205 |
823 |
1027 |
| 3 |
GCGCGTTCCATCTCATATCT |
60.207 |
20 |
TTGCAAGAGGTGCACACAGT |
60.51 |
20 |
220 |
683 |
902 |
|
|
