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Simple sequence repeat (SSR)
>UN16075
AGACAAAATCATCTGTATTATATACTAAAAAGTAAACAAACTACTTCGATTTCATTTTTTGATTTGGTAATGTTTATTGCTCATATCATTCATA
TGTATATCTACAAACACATGAAAGCGTGGCAAATCTAATGTTAGCAAGGGTGAAAAAGAGCAAATTTAAAAGTACAGGGGTGAAAAGTCAAAAA
GAAAAAAGACACAAGGAGGAGGGAAAAGAAGCCGTCTCTCTCTATAGTTCCGGCACGGGACAGTACTCGCTGTGGAAGTCATGAACACCCGAAG
CAGCCCACAGCCGTTGATTAAACTCTTCTTGCATCTCATCCGGAACAAACGGCGTTCTACAGAGAGGACACGTCTTCTGATCGTGATCCATCCA
ACGGTCGAGACAGCTCCGGTGGAATATGTGCCTGCAGTTTCTCAGCCACCGGATCTCTTGCTCTCCTTCGAACTCGTAGAGACAGACGGCGCAG
CTTTCCGGCAGATCCTCGCCGGAGACGTCTTCGAACTTGATGACGGGTAAGATCTCGCGGATTAGGAGGGCGGAGAAGGGGGAGCGGAGTTCGG
TGGGTGTTCGGGTCGGGTGAGATGTGTGGTCGGGCCAGGTTTGGTCCATTTCGAGGAAGTCGGAGAGGCCCAAGAAGCGGAAGAGAGAGAAGAG
GACGGTTCTGATGAAACTGAGTAGGGAGAGTGTTTGTACGAAGAGCTTGGGGATGAAGACCTCTGTGTAGCCTACGGGAAAGCCCATCGGAGCT
AGAGGGAGAATAGAGAGAGAGAGGGTGAGTGAGCTCTGGTTAATAAAGGTTCC |
Primers for UN16075 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTTGGTCCATTTCGAGGAAG |
60.044 |
20 |
GGAACCTTTATTAACCAGAGCTCAC |
60.707 |
25 |
202 |
604 |
805 |
2 |
TGGTCCATTTCGAGGAAGTC |
60.05 |
20 |
GGAACCTTTATTAACCAGAGCTCAC |
60.707 |
25 |
200 |
606 |
805 |
3 |
GTTTGGTCCATTTCGAGGAA |
59.91 |
20 |
GGAACCTTTATTAACCAGAGCTCAC |
60.707 |
25 |
203 |
603 |
805 |
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