 |
Simple sequence repeat (SSR)
>UN01645
CGCCGTTCGACGGCAATCTCGAATTTTTTTCCCCCACACGGCGGGCGATTCGCTCCGTGATGACTTGAACCGCCGATTACCCAACAACTTCCAC
TTTCCCCACAAACCCTAAGCTTTACTGTAGCATTGGTTCCCAAAACCCCCCCCGCTTGGGATTCGTGCTTTTCGCTACCTCGATTTCGTCCCCG
ATCTGCTCGAACTAGGGAAGACGAACCTGCAGCGATCTATTTCAAAGCCTTGTTTTCATTTCCCCCAAAAACCTCAATAATGATGACCTGTTTG
TGCTTGGGAGAACGGTCTTAGTTTATTAATTTAGCAGAGTTGGTTTAATATATATTGGAGTTGAGTCTGGTTCATCTATCAACAATGGAAGCAT
ACAGAGAGGAAGCTATTAGAGTGAAACAGGTCGCCGAGAGGAGATTCGCGGAGAAAGATTTCACTGGCGCCAGGAGCTATGCGTTGAAAGCTAG
GTCTCTGTTTCCTGATCTGGAAGGTTTGACTCAGATGATTGCGACTTTTGAAGTTTACCTGGCTTCTCAGTGTAGAAGCGGCGCCGGTCAGATC
GACTACTACGCCGTGCTTGGACTGAAACCCTCTGCTGGGAAAAGAGACGTGAAGAAACAGTACAAGAAGATGGCTGTCCTGCTCCATCCGGACA
AGAACAAATGCATCGGAGCTGATGGCGCGTTCCATCTCATATCTGAAGCTTGGAAGTTCTTGTCAAATGAGTTCAACAAGAGCACTTTTTACTA
CAAAAGAAGGAAGCATATCGAGTCTACGGTGGTTCAGAAGCACCACCGCGCAGAGTACACGCCACCGGGGACTGCAGCATTTGATCGGTTTCCA
TCATCATCATCATCAGAAAGACTCGACACTTTCTGTACTGTGTGCACCTCTTGCAAAGTTCAGTACGAGTACCTGAGGAAGTACGTGAATAAGA
GGCTTTCGTGTAAGAACTGCCGCGGAGCATTTATAGCTGTGGAAACCGGTCCAGCTCCTGTTAGTGCACCGTTTCATTACACGCCTCCATCTCA
TGCGCCTCCTCCTCCTCCTCTTCATAGTAATGGCTATAGCTCACATAGCTACGATGCACGCATGCCCACAAGTTCCACGTATCTCTTAGGCCAC
TATCCTACGCAAGGACATGGATATGAATATGGTTCATATGATTGGACCTCATCATCGTACCCTGAAACAACCACCTCCCCAGGGAATCTTGATT
TGAAGCGTGTGTCCTCTGTGTCCAATGGGTATCCTTACAAGCACAGCAAATCAGTCGTTAGCACGGGGATAAATAAAGTTAAAGACGGTTCCAA
CGGGACATGCTCGATGAAAACCAAACCAGATGGTCTGATCTATGCTAACCCGCCTGGCCTTTCTACTCATACGGCTGCAGTTAAGGTCGGCAGA
CCTGAGAAGAAGAGCAGAGTATTTATTGAATCGTCTGTTAATGGATTTGTTGAGAACCCTTTGATGAGATCTTCTGCTCCAGCGTCAAAGACAG
CGAACGCAGATTTCAAAATTCACGGGCAAAGCTATGGTTCAACTAGGCGGTGGTCTGCTGCATCAGTATTGGATACACGCAAGCCACTGCTTCA
GAAGGCAAGAGCAGATATTAAGCAAAGACTGGATATCATAAGATTGGCTTCAGAGGCAGCAGCAGCAGCAGCTGTAGAAGACCCGACACCAGTT
GATTCCTGTAAGTTGGGAGATGTCACGGCGGGGCGCGAAACCAGTGGGCCTATAACGGTACCAGACTCTGATTTCCATGATTTCGATAAAAACA
GATCGGAGGAGTGCTTTGAGCCAAGACAAATATGGGCAATCTACGATGAAGATGATGGCATGCCACGCCTGTATTGTGTGGTTAGGGAAGTGCT
CTCTGTTGAGCCCTTTAAGATTGACATAGCCTACTTGAGCTCCAAACCGACATCGAGTTTGGTTCCATGAAGTGGTACAATACGGGTTCACAAA
TCGTGCGGACATTTCAGATACAGACTATGACATAGTGACAGTCACATATCTCGCATCTTTT |
Primers for UN01645 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACCGTTTCATTACACGCCTC |
60 |
20 |
CAGAGGACACACGCTTCAAA |
60.025 |
20 |
233 |
1008 |
1240 |
| 2 |
AGCTCCTGTTAGTGCACCGT |
59.937 |
20 |
CAGAGGACACACGCTTCAAA |
60.025 |
20 |
248 |
993 |
1240 |
| 3 |
GGTCCAGCTCCTGTTAGTGC |
59.874 |
20 |
CAGAGGACACACGCTTCAAA |
60.025 |
20 |
253 |
988 |
1240 |
|
|
