 |
Simple sequence repeat (SSR)
>UN16136
GATGTTGTTTGAGAAGGACAGCTCATTTGACTTTCCGATATGGCCGCGAACCCCCTACCAGTATTCCCCCAAATTTGATTAGATTAATTCTCAA
CAACAACAACAATTCTCTCTCTCTCGATTGATTTGATTTGTGAAAGCAGCAGCCGCCAAAAGAATAGAGAAAAGAAAGATGGTGGACGATCAAT
TCAATGGAGGAACTTGATCGAATCACAGAGAAGAAGAGATCGGGGAAGAAGGTGGGGATTCCTTTCGCCGCAAGACTCCGTTTCCGGTCTCGGT
TTCGATCATCAATCGACTCCTACTGCTTCGCTCGTGAGGCCTTCTCCGATCATCGTCCTCTCGATTGCTTCTTCTTATAGCACCCTTCTCCCTC
ATTCAATCAATCAATCAATAATCTCACATCTTTCCTCTTTCTCCTTCTTTTTTTTTCTTTTTCTTTGTGTGAAAAAATAAAAAATAATAAAATA
TAAAAACGGCTTTTGGGTATGGAAGAAGAAGCTGATTTCGCTGACAAGGATCCTTCTGGCCGCTACATTAGGTATGATGATATCCTGGGGAGAG
GCGCTTTCAAGACTGTATACAAGGCGTTTGATGAAGTAGATGGAATCGAAGTAGCTTGGAACCTAGTGAGCATAGAAGATGTTATGCAGATGCC
TGGTCAGCTCGAAAGGCTCTATTCTGAGTTCATCTCCTTAAAGCCCTTAAACATGATAACATCATCAAACTCTTTCACTCTTGGGTCGACGAGA
ACACCAAGACTATTAACATGATCACCGAGCTTTTCACCTCTGGTAGTCTCAGGCTGTACCGTCAGAAGCATAGGAAGGTTGATCCCAAGGCTAT
CAAGAACTGGGCCAGGCAGATTCTTAAAGGTTTGAACTATTTGCATTCTCAGTCCCCTCCTGTTATTCACCGGGATCTCAAGTGCGACAATATA
TTCGTCAATGGAAACACTGGTGAGATCAAAATTGGTGATCTCGGCCTTGCAACTGTCCTCCAGCAACCCACTGCTCGTAGCGTCATTGGTACTC
CCGAGTTCATGGCACCTGAGCTGTATGAAGAGGAATACGATGAGCTTGTCGACATCTACTCTTTTGGCATGTGTATGTTGGAGATGGTTACCTG
TGAGTACCCCTACAACGATTGCAGAAACCAGGCTCAGATTTACAAGAAGGTCACCTCGGGTATAAAGCCTCAATCTCTCAGCAGAGTTGAGGAT
CCTCAAGTTAGGCAATTCATAGACAAGTGTCTTCTTCCTGCCTCTTCTAGACCAACTGCTCTCCAGCTCTCCATGGACCCCTTCCTTTCCAGAG
ATGGAAGCAAGGACTCTTCTCCTCTTCTTGCTTCAACAAGCACTGCATCTAATCCTGTCAGACCACCACCACAGCTTGAAAATCTTCCCATGGA
TGTGGATCATCATAACGAGGATAAAAGTGTCTCCATCTGCTCCTCTCGAAAGAGCAACAACGAAGAATCGTACCCCTGGTGCCAAACCATTGAA
CTTCAGAGGTTTGCAGAGAATAAAGAGTTCAGGTTGAGAGGAGAAAGGAGCGATGACGTCACTGCGTCAATGCTTCTGCGTATCGGTGATTCAT
CTGGCAAAGGAAGAATCGTACACTTTGCATTCTATCTGAATTCAGACACAGCAACAGCAATCGCTGAGGAAATGGTTGAGGAGCTGCATCTAAC
AAGCCAAGAGGTTGTAGTGATAGCTGATATGATCGATGACTTGATAATGCAACTTCACTCTGAGCGGACCTCATCGCATCCAAATCAAGCCTCT
CAGGATCTAGCCGTCCGTGAGGACCATGAAGCAGCAAATCAGCTAACTGTGAACTCCAAAGATGAAGAATCAATGAAGTCTGGCATATCAACAG
ACTATTACTTGCCTTTTTCCTCAAACGGAAGTGCTGCCAGGGAAGCTGGCCAGGATGCAGAGTCGATGAGCTCGTTTCTTGATTCTTGCTCAAT
GATGTCAACCCTTTACATTTCAGACAACGAGTACCCAGAAGATCTCAAGACAGAACTGAACATGATTGAGTCACAATTTAACCAGTCCGTCCAA
GATCTGATGAAACTAAAGGAAGATGCTATAGAGAACGCAAAGAGAAAATGGATTATGAAAAAGCAATCAAAACCCTGATTTTGGTACTTATTCT
TGGGGCCATGATTGGTGTAATGATATACTTCAATTGGTGTTTGGATATTTTGATTTGATGTATTTTGTACTTAGCAAACATGGAATAGTGTTAT
TCGACTTCTATTATTTCTGTACTTAACAAACATGGAATAGTGTTATTCGACTTCTATTATTTCTGACG |
Primers for UN16136 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCGAACCCCCTACCAGTATT |
60.208 |
20 |
CTCTATTCTTTTGGCGGCTG |
59.975 |
20 |
118 |
46 |
163 |
| 2 |
GCGAACCCCCTACCAGTATT |
60.208 |
20 |
TCCATTGAATTGATCGTCCA |
59.859 |
20 |
151 |
46 |
196 |
| 3 |
GCGAACCCCCTACCAGTATT |
60.208 |
20 |
CCTTCTTCCCCGATCTCTTC |
60.147 |
20 |
195 |
46 |
240 |
|
|
