 |
Simple sequence repeat (SSR)
>UN16139
ATATATAAAACCAATAGTTAAAAATAGAGACCATGCATATAGTTTAGTTACATGTATTGATTGCATTACAAACAAGCAAACATTGATTTTCTTC
TCTTTTTTTTCCTCCCTCTATGGTTATTACATTACATCCCAATGAACAATCACATCAACCGGTTTTAACATTTTTCTTCTTAAAAAAAAGAATC
TTTTTGAAGCTCATCAAATTTAACAAAAGGATGTGAACAAGTCTTGTATCCAAGAATCAAAAGATCATTTGCCTCCTCCTCCTCCTCGCTGTCT
CTTCTCTTCGAGCTGAAAAGCTTCGTTCAACATATCTGCTGCGTCCGTGTTCATGTTCAGCTTCGCTAAAGCTACAGACTGCATGTAAAAAGCC
GTTGGCCAGTCAGGATACACGCATTGCGCCTGCATGGCGTCGCGCAGCGCTGCGTCTGGTTGATCGCATAGTAAGTAGCATAGACTTCTCCGAC
CAAACACAGTTGGTGACACCATTGTTCCAACGTCTATAAACTGTGAGTAACAGTCTATGGCGGTTTTGAAATCTTTCTCGCGGAAAGCTTGATC
ACCACGTTTGCGTGCTTCAAGCATGTCTTTCATCTGTTGAGTCCATTCTTGGAAAGATAACTCGTTAGTCCCTTCGTCGTCTCTGTAGTGTGTC
ATGACCAAGATCTGATGAATAGCTGTGAGATCCATTCTCGAGCAAGCCTCGCCTAACGGCGTAAGTGGCCTCTGTGGCGGCGGCGGCGGCGAAG
GTGCCTCCTCGTGCTTCTTTATTCCAAGCATCACATAAGAAGCGACGTCTGATTTAGTCTGCAAGGGTGCAAGTGTTGCCACAAGGTCTTTTGT
ATTGGGTCTCTCTCGAGGCTCATACTGCAAGCATTGGGAGGCGAGTTCTACAACTACGGTAGCTTCTTCTGTTGAGAACTTTCCTTCAAGGTGT
GAATCCATCAACAGAATAATATTCTTGCCACGTATCATATCCAGAGCATGGCTTGGAGGGATGTGTTTTCCGCTAAGCAAATCAAGAAGCACCG
TTCCAAAGCTGTAAGTAACACTTTCAGGTGTCACTCTTCCATTTCTTAGGTATTCAGGTGGTGTATATGCTAGGTTAGTGCTATAGCTTTTGCC
ATCACGACTGTTCTTCATCAAGCCGAAACATGAGAGACGAGGATCACCATCCTCATCAAAGAGAACCCTGTAAGCATTTAAATCATGGTACAGA
GGACGACCCTCGGTGCTACAATAATCCAAAGCTTCGGCTATGTAATATCCTACTCGCAACCTCATAGCCCATTCAATGGTTTGACTTTCCCAAT
GGAATAAATGCTTAGCGAGAGTATCGTTAGGCATGAACTCAGCGACAAGAAGCCTCTCGTCTCCATCGCAACAGTATCCAATCAAATTCGCCAA
CCGGTTATGTCTGAACTTCCCCACACCCCATGCTTCTTCAGCGAACTGTTTAGGATCAGGCCAAGCCATCTTGGTGAACTTCTTGACGGCGATC
CAACGACGGTTCTGAAGCCGGCCTTTGTAGACAAGATTTGGGGCTTTCTCGGAGCTGAAGTTGTTTGCAGCGGCTGAGCTCCATCTTTCCCGAC
CGGGCTGTCCTCACCAGGACACAGAGATTGACAACAACCCATGAAATTTCTGAACTCCTTTTCTCACGACAGAAACAAAGCCC |
Primers for UN16139 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGTTAGTCCCTTCGTCGTC |
60.255 |
20 |
GTTGTAGAACTCGCCTCCCA |
60.255 |
20 |
275 |
626 |
900 |
| 2 |
TCGTTAGTCCCTTCGTCGTC |
60.255 |
20 |
TGTAGAACTCGCCTCCCAAT |
59.694 |
20 |
273 |
626 |
898 |
| 3 |
TCGTTAGTCCCTTCGTCGTC |
60.255 |
20 |
GTAGAACTCGCCTCCCAATG |
59.694 |
20 |
272 |
626 |
897 |
|
|
