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Simple sequence repeat (SSR)
>UN16164
GGGGGAAAAACAATCAAATTCAAAAACAATTAAAACAAAAATGGCGTTTGCTTCAAAGATCATCACATGCCTCCTCATCCTTGCGATCTACATT
GCCACTCCAACAGAGTCGCACATAACGTGTGGGACAGTGTCAAGCACAATGGCACAGTGCATCAGCTACTTGACCAACGGTGGTCCATTGCCGT
CAAGCTGCTGTGTGGCAGTCAAATCATTGAACCAAATGGCTCAGACCACACCGGATCGCCGACAAGTATGTGAGTGCCTTAAATCAGCCGGTAA
GGAAATTAAAGGCCTCAATATCGACCTTGTGGCCACACTCCCTACCACTTGTGGTGTTTCACTTTCATACCCCATTGGTTTCAACACCAATTGT
GACAGTATTTCGATTTGATTGCCGTGTGAAGGAGGCTAGAGATGTACGAACGAATAATCAAAGTTGGCCAGCCTTTAACCTAAATAATAATGAT
TCTGCTGCTATTTTCTATTATATGACTTGAGTTTCTTATTATGTAACCATCCATTTCATATGGTAAATAAGTAATAACGATAAGGAGCTCTCTC
TCTCTTTTTCGGCGCTTTGATGTATGTAAACGTAAAGTACCATCAGGAATAACACTTTGTCTTTCTCTTACATCTAATATGATCAAGAGGTTGC
ATGAGAAAATGAGCTTTTACTAAACCGCATATGTATATATATATATATGTAAAGTTATAGCATCCAAGAAAAAAGGTTTGTCATAT |
Primers for UN16164 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCGTGTGAAGGAGGCTAGAG |
60.005 |
20 |
TTACATACATCAAAGCGCCG |
59.725 |
20 |
196 |
398 |
593 |
| 2 |
AGTTGGCCAGCCTTTAACCT |
60.13 |
20 |
TTACATACATCAAAGCGCCG |
59.725 |
20 |
156 |
438 |
593 |
| 3 |
TTGGCCAGCCTTTAACCTAA |
59.715 |
20 |
TTACATACATCAAAGCGCCG |
59.725 |
20 |
154 |
440 |
593 |
|
|
